RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 FSCBQ5H9T9 825 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 DBR1Q9UK59 544 aaKnown RBP11.84□□□□□ -0.51
RGPD2-201ENST00000398146 TRIM33Q9UPN9 1127 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 KCNN4O15554 427 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 C21orf59P57076 290 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 FNDC3BQ53EP0 1204 aaKnown RBP11.84□□□□□ -0.51
RGPD2-201ENST00000398146 LDHDQ86WU2 507 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 MIB1Q86YT6 1006 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
RGPD2-201ENST00000398146 CLIP3Q96DZ5 547 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 BBS2Q9BXC9 721 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 MED4Q9NPJ6 270 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 OGFRQ9NZT2 677 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 AOX1Q06278 1338 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 F5H6K3 240 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 PFKFB2O60825 505 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 MRPS25P82663 173 aaKnown RBP11.84□□□□□ -0.51
RGPD2-201ENST00000398146 KLRC3Q07444 240 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 SV2CQ496J9 727 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
RGPD2-201ENST00000398146 LAYNQ6UX15 382 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 IPMKQ8NFU5 416 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 FAR2Q96K12 515 aa11.84□□□□□ -0.51
RGPD2-201ENST00000398146 RNF26Q9BY78 433 aaPredicted RBP11.84□□□□□ -0.51
RGPD2-201ENST00000398146 POTEFA5A3E0 1075 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 POTEIP0CG38 1075 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 ACOT2P49753 483 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 KYAT1Q16773 422 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 POTEGQ6S5H5 508 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 POTEEQ6S8J3 1075 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 DEFB132Q7Z7B7 95 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 FAM162AQ96A26 154 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 CEP95Q96GE4 821 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 GMCL1Q96IK5 515 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 PIH1D3Q9NQM4 214 aaKnown RBP11.83□□□□□ -0.51
RGPD2-201ENST00000398146 IGSF1Q8N6C5 1336 aa11.83□□□□□ -0.51
RGPD2-201ENST00000398146 C3orf70A6NLC5 250 aaPredicted RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 POTECB2RU33 542 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 ADCY3O60266 1144 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 YWHABP31946 246 aaKnown RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 GRK3P35626 688 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 NDUFV1P49821 464 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 TRIM60Q495X7 471 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 RFX8Q6ZV50 586 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 REXO4Q9GZR2 422 aaKnown RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 ADNPQ9H2P0 1102 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 PARVBQ9HBI1 364 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 SPATS2LQ9NUQ6 558 aaKnown RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 TRIM10Q9UDY6 481 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 CHURC1-FNTBB4DL54 471 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 KRT38O76015 456 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 AMHP03971 560 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 NCAM1P13591 858 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 MRPL28Q13084 256 aaKnown RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 CAPRIN2Q6IMN6 1127 aaKnown RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 C16orf87Q6PH81 154 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 MTSS1LQ765P7 747 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 MIER2Q8N344 545 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 EMILIN2Q9BXX0 1053 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 COL15A1P39059 1388 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 MEI4A8MW99 385 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 F8W810 466 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 NBNO60934 754 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 OCA2Q04671 838 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 GPS1Q13098 491 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 SNAP47Q5SQN1 464 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 CENPPQ6IPU0 288 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 DDX42Q86XP3 938 aaKnown RBP eCLIP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 INPP5DQ92835 1189 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 CHL1O00533 1208 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 PRMT3O60678 531 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 WDR47O94967 919 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 PGK2P07205 417 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 SLC11A2P49281 568 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 NHEJ1Q9H9Q4 299 aaPredicted RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 PDZK1P1A8MUH7 402 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 SNAP23O00161 211 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 FGFR2P21802 821 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 TYK2P29597 1187 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 USP44Q9H0E7 712 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.52
RGPD2-201ENST00000398146 V9GYQ6 96 aa11.83□□□□□ -0.52
RGPD2-201ENST00000398146 ARHGEF9O43307 516 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 IFT88Q13099 833 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 PTPAQ15257 358 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 PCDHA13Q9Y5I0 950 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 CIAO1O76071 339 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 ODC1P11926 461 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 CCDC60Q8IWA6 550 aaPredicted RBP11.82□□□□□ -0.52
RGPD2-201ENST00000398146 ZBED8Q8IZ13 594 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 TADA1Q96BN2 335 aa11.82□□□□□ -0.52
RGPD2-201ENST00000398146 LIMA1Q9UHB6 759 aaKnown RBP11.82□□□□□ -0.52
RGPD2-201ENST00000398146 IP6K2Q9UHH9 426 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms