RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 RPS6KA5O75582 802 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 FAM153BP0C7A2 387 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 RALAP11233 206 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 PHKA2P46019 1235 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 FAM153CQ494X1 144 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 WDR59Q6PJI9 974 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 RGS9BPQ6ZS82 235 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 FAM153AQ9UHL3 310 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 FIS1Q9Y3D6 152 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 EIF4E1BA6NMX2 242 aaKnown RBP17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 ACOT2P49753 483 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 NCOA4Q13772 614 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 DCLK2Q8N568 766 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 DCPSQ96C86 337 aaKnown RBP17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 ADAM33Q9BZ11 813 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 OLFML3Q9NRN5 406 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 WHRNQ9P202 907 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 SYF2O95926 243 aaKnown RBP17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 HLA-DRAP01903 254 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 TMEM119Q4V9L6 283 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 TSEN2Q8NCE0 465 aaKnown RBP17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 CNPY4Q8N129 248 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 ATP8B4Q8TF62 1192 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 STAMBPL1Q96FJ0 436 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 PCDHGC5Q9Y5F6 944 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 SPAG6O75602 509 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 PBX1P40424 430 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 BAG6P46379 1132 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 ANO5Q75V66 913 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 TXNRD3Q86VQ6 643 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 TRIML2Q8N7C3 387 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 VPS39Q96JC1 886 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 ITGA4P13612 1032 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 ZFXP17010 805 aaPredicted RBP17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 CNGA1P29973 690 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 AMPD2Q01433 879 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 OLFM3Q96PB7 478 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 PPP1R16BQ96T49 567 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 SUFUQ9UMX1 484 aa17.28■□□□□ 0.36
CTDSP2-201ENST00000398073 KLRC4O43908 158 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 CIITAP33076 1130 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 DYNC1I2Q13409 638 aaKnown RBP17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 LPAR1Q92633 364 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 BTBD6Q96KE9 485 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 MCEEQ96PE7 176 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 ANKEF1Q9NU02 776 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 NQO1P15559 274 aaKnown RBP17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 OSBPP22059 807 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 ZNF844Q08AG5 666 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 DNAJC3Q13217 504 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 DNAL1Q4LDG9 190 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 KLC3Q6P597 504 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 TMC3Q7Z5M5 1100 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 BFARQ9NZS9 450 aa17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 DDX20Q9UHI6 824 aaKnown RBP17.27■□□□□ 0.36
CTDSP2-201ENST00000398073 WDR46O15213 610 aaKnown RBP17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 TNFRSF8P28908 595 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 HIC1Q14526 733 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 TEX9Q8N6V9 391 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 ARHGEF26Q96DR7 871 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 MTO1Q9Y2Z2 717 aaKnown RBP17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 O00370 1275 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 TYK2P29597 1187 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 SERPINB4P48594 390 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 SLC20A2Q08357 652 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 MYBPC2Q14324 1141 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 C1orf228Q6PIY5 440 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 LVRNQ6Q4G3 990 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 C3orf62Q6ZUJ4 267 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 PACS2Q86VP3 889 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 BBS5Q8N3I7 341 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 KCNH7Q9NS40 1196 aa17.27■□□□□ 0.35
CTDSP2-201ENST00000398073 SETSIPP0DME0 302 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 GHRP10912 638 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 ZNF200P98182 395 aaPredicted RBP17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 C11orf63Q6NUN7 778 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 SLC26A7Q8TE54 656 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 CDC42EP4Q9H3Q1 356 aaKnown RBP17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 Q4G0T1 1027 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 DPP9Q86TI2 863 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 FEZF2Q8TBJ5 459 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 DNAJC9Q8WXX5 260 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 NVLO15381 856 aaKnown RBP17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 CYTH3O43739 400 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 SGPL1O95470 568 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 KRT10P13645 584 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 SPC25Q9HBM1 224 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 BAG5Q9UL15 447 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 IGSF9BQ9UPX0 1349 aa17.26■□□□□ 0.35
CTDSP2-201ENST00000398073 APOL1O14791 398 aa17.25■□□□□ 0.35
CTDSP2-201ENST00000398073 KDSRQ06136 332 aa17.25■□□□□ 0.35
CTDSP2-201ENST00000398073 EPC2Q52LR7 807 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms