RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SELPP16109 830 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 SOX5P35711 763 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 MTF1Q14872 753 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 TMEM132DQ14C87 1099 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 MRPL10Q7Z7H8 261 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 CCDC170Q8IYT3 715 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 SHC3Q92529 594 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 JAKMIP2Q96AA8 810 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 C1orf112Q9NSG2 853 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 FAM105AQ9NUU6 356 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 SIX4Q9UIU6 781 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 PCDHB2Q9Y5E7 798 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 TLR3O15455 904 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 PHACTR2O75167 634 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 CST3P01034 146 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 KCNE1P15382 129 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 STAT1P42224 750 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 RAB27AP51159 221 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 MFAP3P55082 362 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 ASTE1Q2TB18 679 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 WDR44Q5JSH3 913 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 SCARA3Q6AZY7 606 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 LRRC8DQ7L1W4 858 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 PPM1KQ8N3J5 372 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 C1orf127Q8N9H9 656 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 TAF4BQ92750 862 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 TATDN2Q93075 761 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 PI4K2AQ9BTU6 479 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 XYLT2Q9H1B5 865 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 CXCL16Q9H2A7 254 aa20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 NHEJ1Q9H9Q4 299 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 BZW2Q9Y6E2 419 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-205ENST00000397761 TULP1O00294 542 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 MGEA5O60502 916 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 PLEKP08567 350 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 FERP16591 822 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 ZSCAN20P17040 1043 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 NOP14P78316 857 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 ASIC2Q16515 512 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 SGSM1Q2NKQ1 1148 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 TOGARAM2Q6ZUX3 1019 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 CCAR2Q8N163 923 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 KAT5Q92993 513 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 FAXDC2Q96IV6 333 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 ZMAT2Q96NC0 199 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 RNF39Q9H2S5 420 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 VRTNQ9H8Y1 702 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 APOBEC3GQ9HC16 384 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 SPTLC3Q9NUV7 552 aa20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 EPN1Q9Y6I3 576 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-205ENST00000397761 FOXN3O00409 490 aaPredicted RBP20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 NDUFA10O95299 355 aa20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 MYL6P60660 151 aa20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 FAM71AQ8IYT1 594 aa20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 DIS3LQ8TF46 1054 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 ITGA11Q9UKX5 1188 aa20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 ADGRG1Q9Y653 693 aa20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 MICAL3Q7RTP6 2002 aa20.96■□□□□ 0.95
PDLIM2-205ENST00000397761 A0A0U1RQF3 1178 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 RBAK-RBAKDNI3L0D1 243 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 EVI5O60447 810 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 PQBP1O60828 265 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 LCA5LO95447 670 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 STAU1O95793 577 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 TBXAS1P24557 533 aaPredicted RBP20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 AKAP5P24588 427 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 ANXA13P27216 316 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 EIF4A3P38919 411 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 TRPC3Q13507 836 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 GPNMBQ14956 572 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 ARHGAP44Q17R89 818 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 HACE1Q8IYU2 909 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 C17orf53Q8N3J3 647 aaPredicted RBP20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 KIF12Q96FN5 646 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 IMPG2Q9BZV3 1241 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 DPP3Q9NY33 737 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 NUB1Q9Y5A7 615 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 TTC3P53804 2025 aa20.95■□□□□ 0.94
PDLIM2-205ENST00000397761 SMIM28A0A1B0GU29 152 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 EIF3CLB5ME19 914 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 ATICP31939 592 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 RGS19P49795 217 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 KLHL30Q0D2K2 578 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 FAAP100Q0VG06 881 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 CUL2Q13617 745 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 SPOPLQ6IQ16 392 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 UBR7Q8N806 425 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 EIF3CQ99613 913 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 SYT11Q9BT88 431 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 IFIH1Q9BYX4 1025 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 CNTN6Q9UQ52 1028 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 PPP2R2CQ9Y2T4 447 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 DCDC2CA8MYV0 355 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 GFPT2O94808 682 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 ITGB3P05106 788 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 CCDC172P0C7W6 258 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 PNMA6AP0CW24 399 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 SKIP12755 728 aa20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 ATF7P17544 494 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-205ENST00000397761 CYLC1P35663 651 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms