RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MCEEQ96PE7 176 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 SH3GL2Q99962 352 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 PFASO15067 1338 aa11.12□□□□□ -0.63
CPSF1P1-201ENST00000397477 MYH11P35749 1972 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 FAM187AA6NFU0 413 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 SGK1O00141 431 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 PODXLO00592 558 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 P4HA2O15460 535 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 EXTL3O43909 919 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 MAGEA9P43362 315 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 RAP1GAPP47736 663 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 NCKAP1LP55160 1127 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 DHX34Q14147 1143 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 CDO1Q16878 200 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 FAM133BQ5BKY9 247 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 KCNT1Q5JUK3 1230 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 GKAP1Q5VSY0 366 aaPredicted RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 SCYL2Q6P3W7 929 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 COPS5Q92905 334 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 PRMT1Q99873 361 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 SAMD15Q9P1V8 674 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 TAF1LQ8IZX4 1826 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 KCNA2P16389 499 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 KRT15P19012 456 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 GLRA2P23416 452 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 CLCN3P51790 818 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 WNT7BP56706 349 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 BPIFB4P59827 614 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 MYL6P60660 151 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 TMED2Q15363 201 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF568Q3ZCX4 644 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 SRRM1Q8IYB3 904 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 CEP120Q8N960 986 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 RAPGEF5Q92565 580 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 APOL6Q9BWW8 343 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 CTNNAL1Q9UBT7 734 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 NOCTQ9UK39 431 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 SYNPO2Q9UMS6 1093 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 AKT3Q9Y243 479 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 NCANO14594 1321 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 A0A087WUV0 522 aaPredicted RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 ITGA8P53708 1063 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 CUL2Q13617 745 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 CLEC16AQ2KHT3 1053 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 WDR72Q3MJ13 1102 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF516Q92618 1163 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 TMEM59LQ9UK28 342 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 DIS3Q9Y2L1 958 aaKnown RBP11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
CPSF1P1-201ENST00000397477 RGS20O76081 388 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 MAP3K6O95382 1288 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 CORO7P57737 925 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 KCTD2Q14681 263 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 MAPK6Q16659 721 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 NIPA1Q7RTP0 329 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 EFCAB13Q8IY85 973 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 MCOLN2Q8IZK6 566 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 RASGEF1CQ8N431 466 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 SPATA33Q96N06 139 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 CALN1Q9BXU9 219 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 PABPC3Q9H361 631 aaKnown RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 UVRAGQ9P2Y5 699 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 SAE1Q9UBE0 346 aaPredicted RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF214Q9UL59 606 aaPredicted RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 R3HDM2Q9Y2K5 976 aaKnown RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 THSD7AQ9UPZ6 1657 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 PLA2G6O60733 806 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 GRAP2O75791 330 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZSCAN5DPP0CG00 497 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 GZMAP12544 262 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 HSPA6P17066 643 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 TNFRSF8P28908 595 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 CDH8P55286 799 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 RPL7AP62424 266 aaKnown RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 TMEM62Q0P6H9 643 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 SMAD1Q15797 465 aaKnown RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF699Q32M78 642 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 SCARA3Q6AZY7 606 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 PNMA8AQ86V59 439 aaPredicted RBP11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 CCDC13Q8IYE1 715 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 VTI1AQ96AJ9 217 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 H0YCG3 227 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 B3GNT9Q6UX72 402 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 ERICH1Q86X53 443 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 HSPH1Q92598 858 aa11.1□□□□□ -0.63
CPSF1P1-201ENST00000397477 ARHGEF2Q92974 986 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms