RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 MTMR12Q9C0I1 747 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 SNTG2Q9NY99 539 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 IPPQ9Y573 584 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 PCDHB2Q9Y5E7 798 aa20.49■□□□□ 0.87
TSPAN4-204ENST00000397404 ANK1P16157 1881 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 A0A0U1RQF3 1178 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 ZNF500O60304 480 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 GHRP10912 638 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 BPIFB4P59827 614 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 RBP5P82980 135 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 DSC3Q14574 896 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 EFCAB13Q8IY85 973 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 PPM1KQ8N3J5 372 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 OR5B17Q8NGF7 314 aa20.48■□□□□ 0.87
TSPAN4-204ENST00000397404 PTPRJQ12913 1337 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 RECQL4O94761 1208 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 EOMESO95936 686 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 CCDC175P0C221 793 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 ATF7P17544 494 aaPredicted RBP20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 NOP14P78316 857 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 DRAP1Q14919 205 aaPredicted RBP20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 C10orf76Q5T2E6 689 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 JADE1Q6IE81 842 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 TRAF7Q6Q0C0 670 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 HELQQ8TDG4 1101 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 SHC3Q92529 594 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 SEMA4DQ92854 862 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 KIF12Q96FN5 646 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 IFIH1Q9BYX4 1025 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 DEF6Q9H4E7 631 aa20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 AGO3Q9H9G7 860 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 NHEJ1Q9H9Q4 299 aaPredicted RBP20.47■□□□□ 0.87
TSPAN4-204ENST00000397404 ATP8B3O60423 1300 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 EIF3CLB5ME19 914 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 VNN1O95497 513 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 ITGA4P13612 1032 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 CD52P31358 61 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 RFC2P35250 354 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 PNPLA4P41247 253 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 MNX1P50219 401 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 WNT7BP56706 349 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 KLHL30Q0D2K2 578 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 MYO1EQ12965 1108 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 ZBTB6Q15916 424 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 TMEM192Q8IY95 271 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 LRRC52Q8N7C0 313 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 SMG8Q8ND04 991 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 EIF3CQ99613 913 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 NXF3Q9H4D5 531 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 C11orf49Q9H6J7 331 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 RGS18Q9NS28 235 aa20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 EPN1Q9Y6I3 576 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-204ENST00000397404 OFD1O75665 1012 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 NDUFA10O95299 355 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 ZNF699Q32M78 642 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 NECAB2Q7Z6G3 386 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 DNAI2Q9GZS0 605 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 NIF3L1Q9GZT8 377 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 DPP3Q9NY33 737 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 PARP2Q9UGN5 583 aa20.45■□□□□ 0.86
TSPAN4-204ENST00000397404 PQBP1O60828 265 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 LCA5LO95447 670 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 NFICP08651 508 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 GOLGA8FQ08AF8 430 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 GOLGA8DPQ0D2H9 430 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 CUL2Q13617 745 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 BMS1Q14692 1282 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 SPA17Q15506 151 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 TDRD12Q587J7 1177 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 HGSNATQ68CP4 663 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 LMBRD2Q68DH5 695 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 ZNF662Q6ZS27 426 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 SLC24A5Q71RS6 500 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 IRF2BP2Q7Z5L9 587 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 ZNF677Q86XU0 584 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 FAM71AQ8IYT1 594 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 C1orf127Q8N9H9 656 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 SEPT8Q92599 483 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 CYP3A43Q9HB55 503 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 PYCARDQ9ULZ3 195 aa20.44■□□□□ 0.86
TSPAN4-204ENST00000397404 KIF2AO00139 706 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 TULP1O00294 542 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 INPPL1O15357 1258 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 MYCP01106 439 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 ZNF667Q5HYK9 610 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 PPP1R2P3Q6NXS1 205 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 ZNF560Q96MR9 790 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 RPS6KC1Q96S38 1066 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 TSPYL2Q9H2G4 693 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 HIPK3Q9H422 1215 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 ELAC1Q9H777 363 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 SPTLC3Q9NUV7 552 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 ARHGAP20Q9P2F6 1191 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 SMIM28A0A1B0GU29 152 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 SOWAHDA6NJG2 315 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 RBAK-RBAKDNI3L0D1 243 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 AKR1B10O60218 316 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 EVI5O60447 810 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 FAM163BP0C2L3 166 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms