RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ECSITQ9BQ95 431 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 NCF1BA6NI72 391 aaPredicted RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 NCF1CA8MVU1 366 aaPredicted RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 HNRNPRO43390 633 aaKnown RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 ERVK-10P10266 1014 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 NCF1P14598 390 aaPredicted RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 PGS1Q32NB8 556 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 NLRP14Q86W24 1093 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 DENND6AQ8IWF6 608 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 SERHL2Q9H4I8 314 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 PIF1Q9H611 641 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 SERHLQ9NQF3 203 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CALB1P05937 261 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 APRTP07741 180 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CACNB3P54284 484 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CDK17Q00537 523 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 ZNF438Q7Z4V0 828 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CATSPER1Q8NEC5 780 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 EXOC4Q96A65 974 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 DNALI1O14645 258 aaPredicted RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 SOX6P35712 828 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 PLA2G4AP47712 749 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 EIF3EP60228 445 aaKnown RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 KLHL17Q6TDP4 642 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 EPHX4Q8IUS5 362 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 STAMBPL1Q96FJ0 436 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 EXO5Q9H790 373 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 SLC39A10Q9ULF5 831 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 PPP2R3BQ9Y5P8 575 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 TCP11X1B4DZS4 312 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 ZBTB7BO15156 539 aaPredicted RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 KCNA3P22001 575 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 KRT76Q01546 638 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 STX3Q13277 289 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 LMBRD2Q68DH5 695 aaPredicted RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 KIF2CQ99661 725 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 CLEC4MQ9H2X3 399 aaPredicted RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 GMNCA6NCL1 334 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 TRIM3O75382 744 aaPredicted RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 ABCD1P33897 745 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 RHAGQ02094 409 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 CNTN1Q12860 1018 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 FAM136AQ96C01 138 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 MAGEF1Q9HAY2 307 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 PCMTD2Q9NV79 361 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 SYNGAP1Q96PV0 1343 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 HECW1Q76N89 1606 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 USP1O94782 785 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 KRT20P35900 424 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 ARF3P61204 181 aaPredicted RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 MGAT5BQ3V5L5 792 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 IZUMO3Q5VZ72 239 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 MOSPD2Q8NHP6 518 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 PDCD10Q9BUL8 212 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 MAFFQ9ULX9 164 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 CHURC1-FNTBB4DL54 471 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 DYRK3O43781 588 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 STRNO43815 780 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 AKAP5P24588 427 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 PGBD2Q6P3X8 592 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 ZNF786Q8N393 782 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 LAD1O00515 517 aa12.92□□□□□ -0.34
SMU1-201ENST00000397149 CSTF3Q12996 717 aaKnown RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 KRCC1Q9NPI7 259 aaPredicted RBP12.92□□□□□ -0.34
SMU1-201ENST00000397149 CFAP99D6REC4 459 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ALBP02768 609 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 NOS3P29474 1203 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PPP2R2AP63151 447 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 ULK3Q6PHR2 472 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 RMDN3Q96TC7 470 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 KANSL2Q9H9L4 492 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 CPSF4O95639 269 aaKnown RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 HIST2H2ACQ16777 129 aaPredicted RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 HIST2H2AA3Q6FI13 130 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 IL17RAQ96F46 866 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 TUFT1Q9NNX1 390 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 SIK3Q9Y2K2 1263 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 DSG3P32926 999 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 KCNK10P57789 538 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 EIF2B5Q13144 721 aaKnown RBP12.91□□□□□ -0.34
SMU1-201ENST00000397149 GALNTL6Q49A17 601 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 PRR23CQ6ZRP0 262 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 KRT74Q7RTS7 529 aa12.91□□□□□ -0.34
SMU1-201ENST00000397149 SFR1Q86XK3 245 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms