RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 RAB21Q9UL25 225 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 PCDHB2Q9Y5E7 798 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 LRRIQ3A6PVS8 624 aaPredicted RBP16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 MEFVO15553 781 aaPredicted RBP16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 IL18RAPO95256 599 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 AFPP02771 609 aaKnown RBP16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 TRIM49P0CI25 452 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 TRIM49CP0CI26 452 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 CXCL8P10145 99 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 ITGB8P26012 769 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 FKBP15Q5T1M5 1219 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 TCERG1LQ5VWI1 586 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 LINC01599Q8WXQ3 324 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 TSPYL2Q9H2G4 693 aaPredicted RBP16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 SNTG2Q9NY99 539 aa16.01■□□□□ 0.15
TM9SF1-202ENST00000396854 A0A0U1RQF3 1178 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 TTC26A0AVF1 554 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 NDUFA10O95299 355 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 SKIP12755 728 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 RAG1P15918 1043 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 LONRF2Q1L5Z9 754 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 SLC10A6Q3KNW5 377 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 MFSD5Q6N075 450 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 MRPL10Q7Z7H8 261 aaKnown RBP16■□□□□ 0.15
TM9SF1-202ENST00000396854 OR8K1Q8NGG5 319 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 CCDC127Q96BQ5 260 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 IQCDQ96DY2 449 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 FNBP1Q96RU3 617 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 CGRRF1Q99675 332 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 ASB7Q9H672 318 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 PLEKHA5Q9HAU0 1116 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
TM9SF1-202ENST00000396854 CAPN11Q9UMQ6 739 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 HES2Q9Y543 173 aa16■□□□□ 0.15
TM9SF1-202ENST00000396854 EPN1Q9Y6I3 576 aaPredicted RBP16■□□□□ 0.15
TM9SF1-202ENST00000396854 RECQL4O94761 1208 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 ABL1P00519 1130 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 GTF2H1P32780 548 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 RTN4RL1Q86UN2 441 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 CD302Q8IX05 232 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 HACE1Q8IYU2 909 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 VWCEQ96DN2 955 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 SNX27Q96L92 541 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 HTATIP2Q9BUP3 242 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 TOPORSQ9NS56 1045 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 C1orf112Q9NSG2 853 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 REXO2Q9Y3B8 237 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 TDRD15B5MCY1 1934 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 C9IYK1 514 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 PES1O00541 588 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 PMM2O15305 246 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 DLATP10515 647 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 FMO5P49326 533 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 YARSP54577 528 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 AMPD2Q01433 879 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 PPP3CAQ08209 521 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 SMC1AQ14683 1233 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 XKR4Q5GH76 650 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 SLC24A5Q71RS6 500 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 WDR49Q8IV35 697 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 CHP1Q99653 195 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 NUP58Q9BVL2 599 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 TTYH3Q9C0H2 523 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 LUC7L2Q9Y383 392 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 TTC3P53804 2025 aa15.99■□□□□ 0.15
TM9SF1-202ENST00000396854 CCDC66A2RUB6 948 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 GTPBP10A4D1E9 387 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 LACTBL1A8MY62 500 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 MAP2K7O14733 419 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 N4BP1O75113 896 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 FAM189BP81408 668 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 PTPRJQ12913 1337 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 TCTN1Q2MV58 587 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 ALKAL1Q6UXT8 129 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 ZNF662Q6ZS27 426 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 NT5DC4Q86YG4 428 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 TMEM199Q8N511 208 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 POP1Q99575 1024 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 TMEM8AQ9HCN3 771 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 CCDC85CA6NKD9 419 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 P4HA2O15460 535 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 PFKMP08237 780 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 OAS2P29728 719 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 AP3M2P53677 418 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 MEA1Q16626 185 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 CBWD6Q4V339 395 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 CBWD3Q5JTY5 395 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 CBWD5Q5RIA9 395 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 CNKSR3Q6P9H4 555 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 C15orf39Q6ZRI6 1047 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 DEFB128Q7Z7B8 93 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 ECHDC2Q86YB7 292 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 EFCAB13Q8IY85 973 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 TSPAN18Q96SJ8 248 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 HAUS4Q9H6D7 363 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms