RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 LNX1Q8TBB1 728 aaPredicted RBP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 RIN2Q8WYP3 895 aaPredicted RBP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 HAPLN2Q9GZV7 340 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 MRPL44Q9H9J2 332 aaKnown RBP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 C11orf16Q9NQ32 467 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 FAM13BQ9NYF5 915 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 PCDHA7Q9UN72 937 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 DERAQ9Y315 318 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 NR2E1Q9Y466 385 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 BACE2Q9Y5Z0 518 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 SYN3O14994 580 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 MEFVO15553 781 aaPredicted RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 GPR37L1O60883 481 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 ME1P48163 572 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 PPP2R3AQ06190 1150 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 SOX4Q06945 474 aaPredicted RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 UVSSAQ2YD98 709 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 RTP2Q5QGT7 225 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 L1TD1Q5T7N2 865 aaKnown RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 SLC39A4Q6P5W5 647 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 CD300LGQ6UXG3 332 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 ANKS3Q6ZW76 656 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 STXBP4Q6ZWJ1 553 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 SFR1Q86XK3 245 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 PDILTQ8N807 584 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 RNF25Q96BH1 459 aaPredicted RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 ACCSQ96QU6 501 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 OXCT2Q9BYC2 517 aaPredicted RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 TRIM9Q9C026 710 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 ASB7Q9H672 318 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 TMEM206Q9H813 350 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 RPF1Q9H9Y2 349 aaKnown RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 PANK4Q9NVE7 773 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 ZDHHC7Q9NXF8 308 aa12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 CPSF3Q9UKF6 684 aaKnown RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 UBQLN1Q9UMX0 589 aaKnown RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.48
NDUFA9-202ENST00000396655 PODXLO00592 558 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 TGM5O43548 720 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 DCXO43602 365 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 CXCL8P10145 99 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 IDEP14735 1019 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 GARTP22102 1010 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 CMA1P23946 247 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 LRPAP1P30533 357 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 KRT85P78386 507 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 RAB33AQ14088 237 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 ENOX2Q16206 610 aaKnown RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 PSMD5Q16401 504 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 ADALQ6DHV7 355 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 NT5DC4Q86YG4 428 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 RNF135Q8IUD6 432 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 RABGGTAQ92696 567 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 MAN1C1Q9NR34 630 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 MTRRQ9UBK8 725 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 USP25Q9UHP3 1055 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 AGO2Q9UKV8 859 aaKnown RBP12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 MAFFQ9ULX9 164 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 ZDHHC9Q9Y397 364 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
NDUFA9-202ENST00000396655 LACTBL1A8MY62 500 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 ANKRD63C9JTQ0 380 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 POLR2DO15514 142 aaKnown RBP12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 MAP3K13O43283 966 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 POU2F2P09086 479 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 HNRNPA1P09651 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 ADSSP30520 456 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 HOXA9P31269 272 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 SNRPFP62306 86 aaKnown RBP12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 SEZ6Q53EL9 994 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 RARS2Q5T160 578 aaKnown RBP12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 SPATA1Q5VX52 437 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 SLC8B1Q6J4K2 584 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 CEP57Q86XR8 500 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 ZDHHC14Q8IZN3 488 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 C3orf58Q8NDZ4 430 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 APPL2Q8NEU8 664 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 HASPINQ8TF76 798 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 RPGRIP1Q96KN7 1286 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 B3GALT6Q96L58 329 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 GOLGA2P5Q9HBQ8 144 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
NDUFA9-202ENST00000396655 KCNH3Q9ULD8 1083 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms