RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MDH1P40925 334 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 BCAR1P56945 870 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ATP1A4Q13733 1029 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 MRPL48Q96GC5 212 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 GMEB1Q9Y692 573 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ABCC2Q92887 1545 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 GTF2H3Q13889 308 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ZCWPW2Q504Y3 356 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 PDXDC2PQ6P474 469 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 C1orf131Q8NDD1 294 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ENKURQ8TC29 256 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF473Q8WTR7 871 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 TRIM62Q9BVG3 475 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 STK32BQ9NY57 414 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 SYNCRIPO60506 623 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 CAAP1Q9H8G2 361 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 PCSK1NQ9UHG2 260 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 MYOM2P54296 1465 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 SH3TC2Q8TF17 1288 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 C1orf54Q8WWF1 131 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 SEC16BQ96JE7 1060 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 PIGUQ9H490 435 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ARHGEF38Q9NXL2 777 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 MAP2P11137 1827 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 TNRQ92752 1358 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 UHRF1BP1LA0JNW5 1464 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 TRIM43BA6NCK2 446 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 RGS20O76081 388 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 CCNE1P24864 410 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 GNA15P30679 374 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 STAT4Q14765 748 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 SLC25A24Q6NUK1 477 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 SLC52A2Q9HAB3 445 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 RPRD1BQ9NQG5 326 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ANO9A1A5B4 782 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 BTN3A3O00478 584 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 SEMA3EO15041 775 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 GYG1P46976 350 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 KCNK10P57789 538 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 E4F1Q66K89 784 aaPredicted RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 KDELC2Q7Z4H8 507 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 RNF25Q96BH1 459 aaPredicted RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 EDC3Q96F86 508 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 CHAMP1Q96JM3 812 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ATP1A3P13637 1013 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 CDH6P55285 790 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 TMEM35BQ8NCS4 154 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 RNASE11Q8TAA1 199 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 HUS1O60921 280 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 TSPAN9O75954 239 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 AGTP01019 485 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 APRTP07741 180 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 YWHABP31946 246 aaKnown RBP10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ASAP3Q8TDY4 903 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 PTPRN2Q92932 1015 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 TRPC7Q9HCX4 862 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 ARHGEF10O15013 1369 aa10.82□□□□□ -0.68
COL4A4-201ENST00000396625 FOXP2O15409 715 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 AKT1P31749 480 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 FAM102AQ5T9C2 384 aaPredicted RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 TRIM66O15016 1216 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 PSTPIP1O43586 416 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 RRM2P31350 389 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 CCT3P49368 545 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 COPAP53621 1224 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 SGO1Q5FBB7 561 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 MLPHQ9BV36 600 aaPredicted RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 SYNDIG1Q9H7V2 258 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 CSNK2BP67870 215 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 REXO4Q9GZR2 422 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 DHX35Q9H5Z1 703 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 PRDM5Q9NQX1 630 aaPredicted RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 LATS2Q9NRM7 1088 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 SYNMO15061 1565 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 FAM187AA6NFU0 413 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 USP14P54578 494 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 OTUD4Q01804 1114 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 CTTNQ14247 550 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 PKN2Q16513 984 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 SYDE1Q6ZW31 735 aaPredicted RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 CCDC24Q8N4L8 307 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 URGCPQ8TCY9 931 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 EVPLLA8MZ36 301 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 FAM25AB3EWG3 89 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 FAM25CB3EWG5 89 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 FAM25GB3EWG6 89 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 FYNP06241 537 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 VN1R5Q7Z5H4 357 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 KIAA0825Q8IV33 1275 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 STKLD1Q8NE28 680 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 ANKRD27Q96NW4 1050 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 DENND3A2RUS2 1198 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 PHF20L1A8MW92 1017 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF862O60290 1169 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 GUCY1B2O75343 617 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms