RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 GNAZP19086 355 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 RRM1P23921 792 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 RPA3P35244 121 aaPredicted RBP10.46□□□□□ -0.73
TRIM39-203ENST00000396547 CPA2P48052 419 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 RCN1Q15293 331 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 IZUMO3Q5VZ72 239 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 RNF43Q68DV7 783 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 PPP1R21Q6ZMI0 780 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 ZNF713Q8N859 430 aaPredicted RBP10.46□□□□□ -0.73
TRIM39-203ENST00000396547 HAUS1Q96CS2 278 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 USH1CQ9Y6N9 552 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 NVLO15381 856 aaKnown RBP10.46□□□□□ -0.74
TRIM39-203ENST00000396547 CDH16O75309 829 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 KRT36O76013 467 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 GAS8O95995 478 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 ZSCAN5DPP0CG00 497 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 BMP3P12645 472 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 SMARCA1P28370 1054 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 MAPK4P31152 587 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 PPP3CAQ08209 521 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 CETN1Q12798 172 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 BFSP1Q12934 665 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 DSTYKQ6XUX3 929 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 C15orf52Q6ZUT6 534 aaKnown RBP10.46□□□□□ -0.74
TRIM39-203ENST00000396547 VPS52Q8N1B4 723 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 AGGF1Q8N302 714 aaeCLIP10.46□□□□□ -0.74
TRIM39-203ENST00000396547 DHX38Q92620 1227 aaKnown RBP10.46□□□□□ -0.74
TRIM39-203ENST00000396547 RBM15Q96T37 977 aaKnown RBP eCLIP10.46□□□□□ -0.74
TRIM39-203ENST00000396547 TRABDQ9H4I3 376 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 CD209Q9NNX6 404 aa10.46□□□□□ -0.74
TRIM39-203ENST00000396547 A0A1W2PPM1 405 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 C2orf71A6NGG8 1288 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 PLS3P13797 630 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CCNB1P14635 433 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ITIH2P19823 946 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ATP6V1C1P21283 382 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 RASSF2P50749 326 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 RAB27AP51159 221 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 RHBDL3P58872 404 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 TNFAIP8L3Q5GJ75 292 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ANKMY2Q8IV38 441 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 BORCS6Q96GS4 357 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 G3BP2Q9UN86 482 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 GPR75-ASB3A0A0A6YYF3 556 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 PI4K2BG5E9Z4 385 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 K7ENM7 598 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 BANF1O75531 89 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CFBP00751 764 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ALAS1P13196 640 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 PIK3CAP42336 1068 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ICA1Q05084 483 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SIX1Q15475 284 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SLC1A5Q15758 541 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CLUL1Q15846 466 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 MDH1BQ5I0G3 518 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 TEX9Q8N6V9 391 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 MCUR1Q96AQ8 359 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 DDX4Q9NQI0 724 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 NMRK1Q9NWW6 199 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 LRRC42Q9Y546 428 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 COL4A5P29400 1685 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 GTPBP10A4D1E9 387 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 MEIS2O14770 477 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CAPN9O14815 690 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 TP73O15350 636 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ATP9AO75110 1047 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 EYA4O95677 639 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 IFNB1P01574 187 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 T-ENOLP0DO92 83 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 RALAP11233 206 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ETS1P14921 441 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CD58P19256 250 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SP100P23497 879 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 HOXA7P31268 230 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 MAGEA4P43358 317 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 NOP14P78316 857 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 MRPS35P82673 323 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CDR2Q01850 454 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SPIRE1Q08AE8 756 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SPARCL1Q14515 664 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 KPNB1Q14974 876 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 FASTKD3Q14CZ7 662 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SNX30Q5VWJ9 437 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 C11orf63Q6NUN7 778 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CCNJLQ8IV13 435 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 PHC3Q8NDX5 983 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ETNPPLQ8TBG4 499 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SCG3Q8WXD2 468 aaKnown RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CPA5Q8WXQ8 436 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SLC7A6OSQ96CW6 309 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SMC6Q96SB8 1091 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 CBWD1Q9BRT8 395 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SYT11Q9BT88 431 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 SERPINB13Q9UIV8 391 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 GRID1Q9ULK0 1009 aa10.45□□□□□ -0.74
TRIM39-203ENST00000396547 ROBO3Q96MS0 1386 aa10.44□□□□□ -0.74
TRIM39-203ENST00000396547 ZBED4O75132 1171 aa10.44□□□□□ -0.74
TRIM39-203ENST00000396547 PRELPP51888 382 aa10.44□□□□□ -0.74
TRIM39-203ENST00000396547 GPSM2P81274 684 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms