RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 FANCMQ8IYD8 2048 aa19.22■□□□□ 0.67
EXOSC3-202ENST00000396521 ROR1Q01973 937 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 GLRA4Q5JXX5 417 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 CYP4A22Q5TCH4 519 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 NT5DC1Q5TFE4 455 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 IQCEQ6IPM2 695 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 C1orf228Q6PIY5 440 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 ALKAL1Q6UXT8 129 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 ING5Q8WYH8 240 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 TRMT61BQ9BVS5 477 aaKnown RBP19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 BRD9Q9H8M2 597 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 C17orf75Q9HAS0 396 aa19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 PRMT8Q9NR22 394 aaPredicted RBP19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 SMG5Q9UPR3 1016 aaKnown RBP19.21■□□□□ 0.67
EXOSC3-202ENST00000396521 WNT7AO00755 349 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 NEFLP07196 543 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 KCNE1P15382 129 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 CD72P21854 359 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 TRAPPC10P48553 1259 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 MLLT6P55198 1093 aaPredicted RBP19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 PDIA5Q14554 519 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 TANGO2Q6ICL3 276 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 CD300LGQ6UXG3 332 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 PDZD4Q76G19 769 aaPredicted RBP19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 E2F7Q96AV8 911 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 OXCT2Q9BYC2 517 aaPredicted RBP19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 MRPL4Q9BYD3 311 aaKnown RBP19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 RAB34Q9BZG1 259 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 GPR88Q9GZN0 384 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 CXCL16Q9H2A7 254 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 FOXP1Q9H334 677 aaPredicted RBP19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 TMEM134Q9H6X4 195 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 RAB23Q9ULC3 237 aa19.2■□□□□ 0.66
EXOSC3-202ENST00000396521 FXR2P51116 673 aaKnown RBP eCLIP19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 SLC5A9Q2M3M2 681 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 APPL2Q8NEU8 664 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 DEPDC1BQ8WUY9 529 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 MSANTD3Q96H12 275 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 ACAP3Q96P50 834 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 ACO2Q99798 780 aaKnown RBP19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 BHMT2Q9H2M3 363 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 CHRDQ9H2X0 955 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 CYP4F11Q9HBI6 524 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 HEBP1Q9NRV9 189 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 GMEB2Q9UKD1 530 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 NUB1Q9Y5A7 615 aa19.19■□□□□ 0.66
EXOSC3-202ENST00000396521 TPRP12270 2363 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 PODXLO00592 558 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 MCF2P10911 925 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 PSMC3P17980 439 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 CCT6AP40227 531 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 BRCC3P46736 316 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 DMP1Q13316 513 aaPredicted RBP19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 FZD5Q13467 585 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 MRPL58Q14197 206 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 ZNF568Q3ZCX4 644 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 PRSS36Q5K4E3 855 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 CELF5Q8N6W0 485 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 C3orf58Q8NDZ4 430 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 SMARCD2Q92925 531 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 ZNF512Q96ME7 567 aaPredicted RBP19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 ASB16Q96NS5 453 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 CORO1BQ9BR76 489 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 PLA2G2FQ9BZM2 168 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 TRPV4Q9HBA0 871 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 PTPRHQ9HD43 1115 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 CDV3Q9UKY7 258 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 USP20Q9Y2K6 914 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 INSL5Q9Y5Q6 135 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 F5P12259 2224 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 EPG5Q9HCE0 2579 aa19.18■□□□□ 0.66
EXOSC3-202ENST00000396521 WDR27A2RRH5 827 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 DTNBO60941 627 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 LRP3O75074 770 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 EDN1P05305 212 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 CEBPBP17676 345 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 CCR3P51677 355 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 MTAPQ13126 283 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 FAM78AQ5JUQ0 283 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 ZNF280DQ6N043 979 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 SUSD3Q96L08 255 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 DRC1Q96MC2 740 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 RTKNQ9BST9 563 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 TCHPQ9BT92 498 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 KIFC3Q9BVG8 833 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 TIPINQ9BVW5 301 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 CDT1Q9H211 546 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 CNTN3Q9P232 1028 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 LRWD1Q9UFC0 647 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 AFF4Q9UHB7 1163 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 DNM3Q9UQ16 869 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 DOCK6Q96HP0 2047 aa19.17■□□□□ 0.66
EXOSC3-202ENST00000396521 MIA3Q5JRA6 1907 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 CCDC169A6NNP5 214 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 I3L4J1 428 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 FOXD2O60548 495 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 JAK2O60674 1132 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 FCARP24071 287 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms