RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 LSP1P33241 339 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 PPP1R2P3Q6NXS1 205 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 PRPF31Q8WWY3 499 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 SPATA33Q96N06 139 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 CCDC77Q9BR77 488 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 ARHGAP28Q9P2N2 729 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 AGTPBP1Q9UPW5 1226 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 TELO2Q9Y4R8 837 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 PCDHA3Q9Y5H8 950 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 FGFR4P22455 802 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 KRT17Q04695 432 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 MCOLN2Q8IZK6 566 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 SPATC1LQ9H0A9 340 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 PRKCBP05771 671 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 OSBPP22059 807 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 YWHAEP62258 255 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF844Q08AG5 666 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 LY6KQ17RY6 165 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 PPP1R16BQ96T49 567 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 DNAJC17Q9NVM6 304 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 COQ4Q9Y3A0 265 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 RGS20O76081 388 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 PGK2P07205 417 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 SURF1Q15526 300 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 TAOK1Q7L7X3 1001 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 GPC2Q8N158 579 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 CGRRF1Q99675 332 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
PDXDC1-202ENST00000396410 HADHBP55084 474 aaKnown RBP12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF568Q3ZCX4 644 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 PRELID2Q8N945 189 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 SYT11Q9BT88 431 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 ANAPC5Q9UJX4 755 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 ATP2C2O75185 946 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 SKOR1P84550 965 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 SP2Q02086 613 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF699Q32M78 642 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 CCDC121Q6ZUS5 278 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 MMP19Q99542 508 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 EPN3Q9H201 632 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 ACSL3O95573 720 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 KRT1P04264 644 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 RARAP10276 462 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 AP3M2P53677 418 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 ZACNQ401N2 412 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 PPM1EQ8WY54 764 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 HOMER3Q9NSC5 361 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 PARVAQ9NVD7 372 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 RGS17Q9UGC6 210 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF148Q9UQR1 794 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 FAM169AQ9Y6X4 670 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
PDXDC1-202ENST00000396410 GOLGA8SH3BPF8 625 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 RASGRF2O14827 1237 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 CLTAP09496 248 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ADCY2Q08462 1091 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 MXD4Q14582 209 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 C6orf118Q5T5N4 469 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 IER5Q5VY09 327 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 CABS1Q96KC9 395 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 C2orf40Q9H1Z8 148 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF408Q9H9D4 720 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ATP2A1O14983 1001 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 TRIM66O15016 1216 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 FNTAP49354 379 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 LIG3P49916 1009 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 SEC24CP53992 1094 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 SLC29A2Q14542 456 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 DUPD1Q68J44 220 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 TMEM35BQ8NCS4 154 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 REPS2Q8NFH8 660 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ATP5DP30049 168 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 RPL21P46778 160 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 SF3A3Q12874 501 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■■□ 19.7
PDXDC1-202ENST00000396410 METTL7BQ6UX53 244 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 SPATS2Q86XZ4 545 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ATG4AQ8WYN0 398 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 RPF1Q9H9Y2 349 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 KLHL11Q9NVR0 708 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms