RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 PPP1R7Q15435 360 aa17.06■□□□□ 0.32
CCHCR1-202ENST00000396263 SGO2Q562F6 1265 aa17.06■□□□□ 0.32
CCHCR1-202ENST00000396263 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
CCHCR1-202ENST00000396263 MCOLN2Q8IZK6 566 aa17.06■□□□□ 0.32
CCHCR1-202ENST00000396263 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
CCHCR1-202ENST00000396263 MAIP1Q8WWC4 291 aa17.06■□□□□ 0.32
CCHCR1-202ENST00000396263 CCDC134Q9H6E4 229 aa17.06■□□□□ 0.32
CCHCR1-202ENST00000396263 VWA5AO00534 786 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 RASSF9O75901 435 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 DGAT1O75907 488 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 MAN1A1P33908 653 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 NF2P35240 595 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 SLC1A1P43005 524 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 SOX10P56693 466 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 CLDN10P78369 228 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 SYDE1Q6ZW31 735 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 EPS8L3Q8TE67 593 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 TRIM11Q96F44 468 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 SELENOSQ9BQE4 189 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 GGA3Q9NZ52 723 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 MROH7Q68CQ1 1323 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 MYPNQ86TC9 1320 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 RASGRF2O14827 1237 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 ABCD1P33897 745 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 KRT17Q04695 432 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 AUHQ13825 339 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 LACTB2Q53H82 288 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 RHBDF2Q6PJF5 856 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 C1orf112Q9NSG2 853 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 PCDHB2Q9Y5E7 798 aa17.05■□□□□ 0.32
CCHCR1-202ENST00000396263 DOCK1Q14185 1865 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 GOLGA6L7A0A1B0GV03 622 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 SMIM23A6NLE4 172 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 NR3C2P08235 984 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 KCNA2P16389 499 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 MTMR2Q13614 643 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 ANKRD20A8PQ5CZ79 823 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 WLSQ5T9L3 541 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 TAS1R3Q7RTX0 852 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 ELMO3Q96BJ8 720 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 FAM213AQ9BRX8 229 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 KIAA1586Q9HCI6 787 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 XPNPEP1Q9NQW7 623 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 AAASQ9NRG9 546 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 RNF146Q9NTX7 359 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 FZD1Q9UP38 647 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 H0YCG3 227 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 ASAP2O43150 1006 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 ITIH2P19823 946 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 BPIFB4P59827 614 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 C1orf54Q8WWF1 131 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 ZNF516Q92618 1163 aa17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 CDC42EP4Q9H3Q1 356 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-202ENST00000396263 EXTL3O43909 919 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 PSAPP07602 524 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 CENPCQ03188 943 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 PTP4A2Q12974 167 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 PTK6Q13882 451 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 C9orf131Q5VYM1 1079 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 TAOK1Q7L7X3 1001 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 ATG4CQ96DT6 458 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 RIPK3Q9Y572 518 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 NFASCO94856 1347 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 CYP1A1P04798 512 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 RRM1P23921 792 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 IVDP26440 423 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 PSMD6Q15008 389 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 UHMK1Q8TAS1 419 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 CCT6BQ92526 530 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 BICD1Q96G01 975 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 IFT74Q96LB3 600 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 TRIM7Q9C029 511 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 KDM4CQ9H3R0 1056 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 ATP6V0A4Q9HBG4 840 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 SLC24A3Q9HC58 644 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCHCR1-202ENST00000396263 SSC5DA1L4H1 1573 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 RLFQ13129 1914 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 PPP1R12AO14974 1030 aaPredicted RBP17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 GHRP10912 638 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 SLCO1A2P46721 670 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 SPRED3Q2MJR0 410 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 ZACNQ401N2 412 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 SWSAP1Q6NVH7 229 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 PIGWQ7Z7B1 504 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 TAX1BP1Q86VP1 789 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 CCDC25Q86WR0 208 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 CCDC197Q8NCU1 140 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 GRK7Q8WTQ7 553 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms