RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PBXIP1Q96AQ6 731 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HIST1H2AHQ96KK5 128 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HIST1H2AJQ99878 128 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 H2AFJQ9BTM1 129 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 NT5C1AQ9BXI3 368 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 XPO7Q9UIA9 1087 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 KIF28PB7ZC32 967 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 UCHL3P15374 230 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 NCAPHQ15003 741 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 MRPL1Q9BYD6 325 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 FRMD8Q9BZ67 464 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 DDX47Q9H0S4 455 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 AXIN2Q9Y2T1 843 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 A0A1B0GTH6 734 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 ANGPT2O15123 496 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 AGTP01019 485 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 POLBP06746 335 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 FXR2P51116 673 aaKnown RBP eCLIP5.74□□□□□ -1.492e-7■■■■□ 20.3
VPS13C-204ENST00000395898 ZNF746Q6NUN9 644 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 ANKS3Q6ZW76 656 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 GLYCTKQ8IVS8 523 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CCNYL1Q8N7R7 359 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HIPK4Q8NE63 616 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PTPRN2Q92932 1015 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 NR1H4Q96RI1 486 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CPVLQ9H3G5 476 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 LIMA1Q9UHB6 759 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PREX1Q8TCU6 1659 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 ADORA2BP29275 332 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 HMOX2P30519 316 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 GTF2H3Q13889 308 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 FLOT2Q14254 428 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 NR1I3Q14994 352 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 DCAF4L1Q3SXM0 396 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ZC3H12BQ5HYM0 836 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 THEMIS2Q5TEJ8 643 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ARHGAP18Q8N392 663 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RDM1Q8NG50 284 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SPON2Q9BUD6 331 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RUBCNLQ9H714 662 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SELENONQ9NZV5 590 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 MAD2L2Q9UI95 211 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 CASZ1Q86V15 1759 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 LRRIQ3A6PVS8 624 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 H0Y626 953 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 CYP26A1O43174 497 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 TRIM16O95361 564 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 KCNA4P22459 653 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RPA1P27694 616 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SULT1E1P49888 294 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 DPYDQ12882 1025 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF211Q13398 564 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 DGKDQ16760 1214 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SGSM3Q96HU1 749 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RGL1Q9NZL6 768 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PRPF4O43172 522 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF200P98182 395 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 NAB2Q15742 525 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 UGT3A1Q6NUS8 523 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 TTC30AQ86WT1 665 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PLEKHA5Q9HAU0 1116 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ETNK1Q9HBU6 452 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RAB6BQ9NRW1 208 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RRN3P2A6NIE6 340 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 KBTBD13C9JR72 458 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ATP9BO43861 1147 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PNPLA4P41247 253 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 POTEAQ6S8J7 498 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SYN2Q92777 582 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 REEP2Q9BRK0 252 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 GTPBP10A4D1E9 387 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SNAP23O00161 211 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 CDH2P19022 906 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 MAPRE1Q15691 268 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 AASDHQ4L235 1098 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 DNAL1Q4LDG9 190 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 TEKT4Q8WW24 435 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PRMT1Q99873 361 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 MKNK1Q9BUB5 465 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RSAD1Q9HA92 442 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF556Q9HAH1 456 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PRMT7Q9NVM4 692 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 CD163L1Q9NR16 1453 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 MYH10P35580 1976 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 FAM196BA6NMK8 535 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 NDUFS3O75489 264 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 GH1P01241 217 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RPS12P25398 132 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 HADHAP40939 763 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RGS4P49798 205 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 HOMEZQ8IX15 550 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ATPAF2Q8N5M1 289 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SPATA18Q8TC71 538 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RIT2Q99578 217 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 CCDC90BQ9GZT6 254 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 AFDNP55196 1824 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 CFAP69A5D8W1 941 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ACOT2P49753 483 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SPDYAQ5MJ70 313 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms