RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SLC8B1Q6J4K2 584 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 RALGPS2Q86X27 583 aaPredicted RBP15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 ZNF461Q8TAF7 563 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 CORO1BQ9BR76 489 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 BRPF3Q9ULD4 1205 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 A0A1B0GUA9 196 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 HEPACAM2A8MVW5 462 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 TMEM189-UBE2V1I3L0A0 370 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 CDC27P30260 824 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 RFC5P40937 340 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 ROR1Q01973 937 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 RTN1Q16799 776 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 TCEAL8Q8IYN2 117 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 HACE1Q8IYU2 909 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 ETNPPLQ8TBG4 499 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 ADAM32Q8TC27 787 aa15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 DDX27Q96GQ7 796 aaKnown RBP15.2■□□□□ 0.02
VCPKMT-201ENST00000395859 ABCA7Q8IZY2 2146 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 CYP3A7-CYP3A51PA0A087WV96 503 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 EML1O00423 815 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 B4GALT5O43286 388 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 SEC24AO95486 1093 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 CAVIN2O95810 425 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 NEFLP07196 543 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 CCDC192P0DO97 292 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 CYP3A7P24462 503 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 KIAA1211LQ6NV74 962 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 SLC27A1Q6PCB7 646 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 EXOC8Q8IYI6 725 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 ZSCAN18Q8TBC5 510 aaPredicted RBP15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 LRRC3BQ96PB8 259 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 NFKBIZQ9BYH8 718 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 C6orf50Q9HD87 102 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
VCPKMT-201ENST00000395859 ARID2Q68CP9 1835 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 NPTXRO95502 500 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 LRG1P02750 347 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 ATF2P15336 505 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 TKTP29401 623 aaKnown RBP15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 EMC2Q15006 297 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 PON2Q15165 354 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 C19orf48Q6RUI8 117 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 PDZD4Q76G19 769 aaPredicted RBP15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 CDR2LQ86X02 465 aaPredicted RBP15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 HS6ST3Q8IZP7 471 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 CSGALNACT1Q8TDX6 532 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 E2F7Q96AV8 911 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 CEP170P1Q96L14 293 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 TRIM6Q9C030 488 aaPredicted RBP15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 TMEM9BQ9NQ34 198 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 ANKFY1Q9P2R3 1169 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
VCPKMT-201ENST00000395859 QARSP47897 775 aaKnown RBP15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 COL28A1Q2UY09 1125 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 CAMKK1Q8N5S9 505 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 DEFB124Q8NES8 71 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 TCP11Q8WWU5 503 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 CHFRQ96EP1 664 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 LRRC3Q9BY71 257 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 SNTG2Q9NY99 539 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 CEP72Q9P209 647 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 PARP2Q9UGN5 583 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 INSL5Q9Y5Q6 135 aa15.17■□□□□ 0.02
VCPKMT-201ENST00000395859 KIF26AQ9ULI4 1882 aaPredicted RBP15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 INO80B-WBP1J3KQ70 363 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 SLC27A2O14975 620 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 IGHDP01880 384 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 THP07101 528 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 GJA1P17302 382 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 GNA11P29992 359 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 KPNA1P52294 538 aaPredicted RBP15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 CAPSQ13938 189 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 ANKS3Q6ZW76 656 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 SHKBP1Q8TBC3 707 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 VAV3Q9UKW4 847 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 ATG2BQ96BY7 2078 aa15.16■□□□□ 0.02
VCPKMT-201ENST00000395859 DCLK1O15075 740 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 ZBTB43O43298 467 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 TDP2O95551 362 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 RCAN1P53805 252 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 FGD1P98174 961 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 EXOSC10Q01780 885 aaKnown RBP15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 CREB5Q02930 508 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 NCBP1Q09161 790 aaKnown RBP15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 PPP2R5CQ13362 524 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 MXD4Q14582 209 aaPredicted RBP15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 TEAD2Q15562 447 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 CYP4A22Q5TCH4 519 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 SYNE3Q6ZMZ3 975 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 PIP4P1Q86T03 277 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 C4orf19Q8IY42 314 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 LEMD2Q8NC56 503 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 C3orf58Q8NDZ4 430 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 CCDC12Q8WUD4 166 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms