RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 TNS4Q8IZW8 715 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 FAM13CQ8NE31 585 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 NPLOC4Q8TAT6 608 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 ABTB1Q969K4 478 aaPredicted RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 INPP4AQ96PE3 977 aaPredicted RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 RMDN3Q96TC7 470 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 DDX50Q9BQ39 737 aaKnown RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 VTA1Q9NP79 307 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 PDP2Q9P2J9 529 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 CIDEBQ9UHD4 219 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 GDAQ9Y2T3 454 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 PLXNA1Q9UIW2 1896 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 SIGLEC16A6NMB1 481 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 PALMO75781 387 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 IGHA2P01877 340 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 INHAP05111 366 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 ALOX15P16050 662 aaPredicted RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 EEF1GP26641 437 aaKnown RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 IFI35P80217 286 aaPredicted RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 NR5A1Q13285 461 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 PKN1Q16512 942 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 CCDC92Q53HC0 331 aaPredicted RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 MAP3K21Q5TCX8 1036 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 CCDC80Q76M96 950 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 TMEM110Q86TL2 294 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 SNRNP27Q8WVK2 155 aaKnown RBP9.66□□□□□ -0.86
RAE1-202ENST00000395840 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 GATA6Q92908 595 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 EEF2KMTQ96G04 330 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 FAM81BQ96LP2 452 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 RMDN2Q96LZ7 410 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 HAPLN3Q96S86 360 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 BRD8Q9H0E9 1235 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 HSFX1Q9UBD0 423 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 ATP8A1Q9Y2Q0 1164 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 ARL2BPQ9Y2Y0 163 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 COMMD3-BMI1R4GMX3 469 aa9.66□□□□□ -0.86
RAE1-202ENST00000395840 PCNTO95613 3336 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 TCP11X1B4DZS4 312 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 ENTPD5O75356 428 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 GJB6O95452 261 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 AFPP02771 609 aaKnown RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 MMP1P03956 469 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 UBTFL6P0CB48 400 aaPredicted RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 CCND2P30279 289 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 VHLP40337 213 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 SKIV2L2P42285 1042 aaKnown RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 PMS1P54277 932 aaKnown RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 EIF3BP55884 814 aaKnown RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 CAP1Q01518 475 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 EHHADHQ08426 723 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 PRPF4BQ13523 1007 aaKnown RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 STXBP2Q15833 593 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 PARP6Q2NL67 630 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 OLFML1Q6UWY5 402 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 SLC30A10Q6XR72 485 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 DAGLBQ8NCG7 672 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 TRIB2Q92519 343 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 KCNN1Q92952 543 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 AGAP3Q96P47 875 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 OXCT2Q9BYC2 517 aaPredicted RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 MAGEC2Q9UBF1 373 aaPredicted RBP9.65□□□□□ -0.86
RAE1-202ENST00000395840 ZSWIM8A7E2V4 1837 aa9.65□□□□□ -0.86
RAE1-202ENST00000395840 SOWAHBA6NEL2 793 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 O00370 1275 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 PJA2O43164 708 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 CAPN15O75808 1086 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 LCA5LO95447 670 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 NAT1P18440 290 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 COL13A1Q5TAT6 717 aaPredicted RBP9.65□□□□□ -0.87
RAE1-202ENST00000395840 ZNF658Q5TYW1 1059 aaPredicted RBP9.65□□□□□ -0.87
RAE1-202ENST00000395840 DUS1LQ6P1R4 473 aaKnown RBP9.65□□□□□ -0.87
RAE1-202ENST00000395840 ARMCX2Q7L311 632 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 REXO1Q8N1G1 1221 aaKnown RBP9.65□□□□□ -0.87
RAE1-202ENST00000395840 WDR60Q8WVS4 1066 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 SCG3Q8WXD2 468 aaKnown RBP9.65□□□□□ -0.87
RAE1-202ENST00000395840 GPKOWQ92917 476 aaPredicted RBP eCLIP9.65□□□□□ -0.87
RAE1-202ENST00000395840 LENG1Q96BZ8 264 aaPredicted RBP9.65□□□□□ -0.87
RAE1-202ENST00000395840 TMEM237Q96Q45 408 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 TUBGCP2Q9BSJ2 902 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 CCDC113Q9H0I3 377 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 AZI2Q9H6S1 392 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 PXMP2Q9NR77 195 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.65□□□□□ -0.87
RAE1-202ENST00000395840 TMEM59LQ9UK28 342 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 PLAGL2Q9UPG8 496 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 SH3GLB1Q9Y371 365 aa9.65□□□□□ -0.87
RAE1-202ENST00000395840 FRMPD4Q14CM0 1322 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 ASLP04424 464 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 ITGA2BP08514 1039 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 ZCCHC18P0CG32 403 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 PRKAR2AP13861 404 aaKnown RBP9.64□□□□□ -0.87
RAE1-202ENST00000395840 ELNP15502 786 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 EDNRBP24530 442 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 CNTN2Q02246 1040 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 GFPT1Q06210 699 aaPredicted RBP9.64□□□□□ -0.87
RAE1-202ENST00000395840 LRRC14Q15048 493 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 CCDC6Q16204 474 aa9.64□□□□□ -0.87
RAE1-202ENST00000395840 LRRC8CQ8TDW0 803 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms