RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 C1orf220Q5T0J3 134 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 PCNX4Q63HM2 1172 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 ATL2Q8NHH9 583 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 WNK4Q96J92 1243 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.61
ACTN1-203ENST00000394419 WRNIP1Q96S55 665 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 ATP6V0A4Q9HBG4 840 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 JPH1Q9HDC5 661 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-203ENST00000394419 PEX10O60683 326 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.62
ACTN1-203ENST00000394419 SFNP31947 248 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 NLRP11P59045 1033 aaKnown RBP11.21□□□□□ -0.62
ACTN1-203ENST00000394419 BPIFB4P59827 614 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 CXCL9Q07325 125 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 GPS1Q13098 491 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 GNPTABQ3T906 1256 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 CIAPIN1Q6FI81 312 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 TRPM8Q7Z2W7 1104 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 EXOC3L1Q86VI1 746 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 ANKMY2Q8IV38 441 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 C4orf19Q8IY42 314 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 THNSL1Q8IYQ7 743 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 C4orf33Q8N1A6 199 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 MAIP1Q8WWC4 291 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 RBM15Q96T37 977 aaKnown RBP eCLIP11.21□□□□□ -0.628e-6■■■■■ 30.1
ACTN1-203ENST00000394419 C10orf88Q9H8K7 445 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 PXMP2Q9NR77 195 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 ABCF3Q9NUQ8 709 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 KLHL14Q9P2G3 628 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 RREB1Q92766 1687 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 GH1P01241 217 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 PSMC4P43686 418 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 CLEC16AQ2KHT3 1053 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 SMTNL2Q2TAL5 461 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 HELQQ8TDG4 1101 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 CLEC4DQ8WXI8 215 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 PCYOX1Q9UHG3 505 aa11.21□□□□□ -0.62
ACTN1-203ENST00000394419 EIF4E1BA6NMX2 242 aaKnown RBP11.2□□□□□ -0.62
ACTN1-203ENST00000394419 CFHP08603 1231 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 MUTP22033 750 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 NAA25Q14CX7 972 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 RHOT1Q8IXI2 618 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 RTKN2Q8IZC4 609 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 MCPH1Q8NEM0 835 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 NSUN6Q8TEA1 469 aaKnown RBP11.2□□□□□ -0.62
ACTN1-203ENST00000394419 LBHD1Q9BQE6 289 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-203ENST00000394419 PAGR1Q9BTK6 254 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 PITPNM3Q9BZ71 974 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 MRPL47Q9HD33 250 aaKnown RBP11.2□□□□□ -0.62
ACTN1-203ENST00000394419 MYOZ2Q9NPC6 264 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 FBXO40Q9UH90 709 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 ZNRF3Q9ULT6 936 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 CEP83Q9Y592 693 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 UBIAD1Q9Y5Z9 338 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 ATP2A1O14983 1001 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 DKC1O60832 514 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■■■■■ 54.2
ACTN1-203ENST00000394419 WEE2P0C1S8 567 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 DPEP1P16444 411 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 ITIH2P19823 946 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 FNTAP49354 379 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 ARSEP51690 589 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 ORC1Q13415 861 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 MYBPC2Q14324 1141 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 NBPF12Q5TAG4 269 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-203ENST00000394419 HHATQ5VTY9 493 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 DNAJC24Q6P3W2 148 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 KIRREL3Q8IZU9 778 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 FUKQ8N0W3 1084 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 RBBP8NLQ8NC74 664 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-203ENST00000394419 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 PGM2Q96G03 612 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 ALG13Q9NP73 1137 aaKnown RBP11.2□□□□□ -0.62
ACTN1-203ENST00000394419 PCSK1NQ9UHG2 260 aa11.2□□□□□ -0.62
ACTN1-203ENST00000394419 GOLGA8RI6L899 631 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 PIK3R2O00459 728 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ZNF862O60290 1169 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 DGAT1O75907 488 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 UBOX5O94941 541 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 CPP00450 1065 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 EGFRP00533 1210 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ETS1P14921 441 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 CA4P22748 312 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 HSD17B4P51659 736 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ACTR2P61160 394 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 TNFAIP1Q13829 316 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 CYP4A22Q5TCH4 519 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 CCDC60Q8IWA6 550 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ZBED8Q8IZ13 594 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 MCEEQ96PE7 176 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 NPM3O75607 178 aaKnown RBP11.19□□□□□ -0.62
ACTN1-203ENST00000394419 NUDT17P0C025 328 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 PTGER2P43116 358 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 NFIL3Q16649 462 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms