RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ZNF516Q92618 1163 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 C17orf75Q9HAS0 396 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
CBX1-202ENST00000393408 PCDHB2Q9Y5E7 798 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 UMODL1Q5DID0 1318 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 THAP12O43422 761 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 C21orf2O43822 256 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 GARTP22102 1010 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 ADCY8P40145 1251 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 IRX3P78415 501 aaPredicted RBP20.07■□□□□ 0.8
CBX1-202ENST00000393408 CKAP2Q8WWK9 683 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 RMDN3Q96TC7 470 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 FAM213AQ9BRX8 229 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 MOV10L1Q9BXT6 1211 aaKnown RBP20.07■□□□□ 0.8
CBX1-202ENST00000393408 PXMP2Q9NR77 195 aa20.07■□□□□ 0.8
CBX1-202ENST00000393408 FOXO6A8MYZ6 492 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 HNRNPDLO14979 420 aaKnown RBP20.06■□□□□ 0.8
CBX1-202ENST00000393408 PROSCO94903 275 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 ATP6V1G2O95670 118 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 CYP1A1P04798 512 aaPredicted RBP20.06■□□□□ 0.8
CBX1-202ENST00000393408 MPP2Q14168 576 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 RDM1Q8NG50 284 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 PWWP2AQ96N64 755 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 TACO1Q9BSH4 297 aaKnown RBP20.06■□□□□ 0.8
CBX1-202ENST00000393408 AGAP1Q9UPQ3 857 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 TESPA1A2RU30 521 aaPredicted RBP20.06■□□□□ 0.8
CBX1-202ENST00000393408 CFAP73A6NFT4 308 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 UBOX5O94941 541 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 RALAP11233 206 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 C2CD6Q53TS8 623 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 DAB2IPQ5VWQ8 1189 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 MON1BQ7L1V2 547 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 LPAR1Q92633 364 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 CEP170P1Q96L14 293 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 HEMGNQ9BXL5 484 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 KCNK9Q9NPC2 374 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 LGALS13Q9UHV8 139 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 MCM8Q9UJA3 840 aa20.06■□□□□ 0.8
CBX1-202ENST00000393408 O00370 1275 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 ZNF862O60290 1169 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 STBD1O95210 358 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 NSFP46459 744 aaKnown RBP20.05■□□□□ 0.8
CBX1-202ENST00000393408 VPS41P49754 854 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 BRDTQ58F21 947 aaPredicted RBP20.05■□□□□ 0.8
CBX1-202ENST00000393408 RPAINQ86UA6 219 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 ANKRD42Q8N9B4 389 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 PCDHA10Q9Y5I2 948 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 PSTPIP1O43586 416 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 APBA3O96018 575 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 CETPP11597 493 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 BRAFP15056 766 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 SLC8A1P32418 973 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 BPIFB4P59827 614 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 DGKZQ13574 1117 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 CCNG2Q16589 344 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 GALNTL6Q49A17 601 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 NUGGCQ68CJ6 796 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 TAS1R3Q7RTX0 852 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 CEP57Q86XR8 500 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 CYP4X1Q8N118 509 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 SENP7Q9BQF6 1050 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 MLXIPLQ9NP71 852 aa20.05■□□□□ 0.8
CBX1-202ENST00000393408 FER1L6Q2WGJ9 1857 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 COL4A5P29400 1685 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 SUN1O94901 812 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 CLDN10P78369 228 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 NEDD9Q14511 834 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 NOD2Q9HC29 1040 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 PDLIM7Q9NR12 457 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 GABBR1Q9UBS5 961 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 GH1P01241 217 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 TAS2R40P59535 323 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 NCALDP61601 193 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 ARHGEF16Q5VV41 709 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 RELL1Q8IUW5 271 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 MTMR14Q8NCE2 650 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 BBOF1Q8ND07 529 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 FAM212AQ96EL1 285 aa20.04■□□□□ 0.8
CBX1-202ENST00000393408 RIPK1Q13546 671 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 ZACNQ401N2 412 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 LMBRD2Q68DH5 695 aaPredicted RBP20.03■□□□□ 0.8
CBX1-202ENST00000393408 TBC1D1Q86TI0 1168 aaPredicted RBP20.03■□□□□ 0.8
CBX1-202ENST00000393408 RHOT1Q8IXI2 618 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 KATNAL2Q8IYT4 538 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 CCDC89Q8N998 374 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 GDAP1Q8TB36 358 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 BICD1Q96G01 975 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 KIAA1683Q9H0B3 1180 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 XPNPEP1Q9NQW7 623 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 NAALADL1Q9UQQ1 740 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 KIAA1217Q5T5P2 1943 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 EXTL3O43909 919 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 CDH16O75309 829 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 GJB6O95452 261 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 HLA-DRAP01903 254 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 FDX1P10109 184 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 ACO1P21399 889 aaKnown RBP20.03■□□□□ 0.8
CBX1-202ENST00000393408 RTP1P59025 263 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 WDR44Q5JSH3 913 aa20.03■□□□□ 0.8
CBX1-202ENST00000393408 LIN9Q5TKA1 542 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms