RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 CCDC51Q96ER9 411 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 DESI2Q9BSY9 194 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 GCOM2Q9BZD3 368 aaPredicted RBP11.67□□□□□ -0.54
PDGFD-202ENST00000393158 MMRN2Q9H8L6 949 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 PLXNA4Q9HCM2 1894 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 SNTG2Q9NY99 539 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 ANO9A1A5B4 782 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 GJA8P48165 433 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 MXI1P50539 228 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 PTK2Q05397 1052 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
PDGFD-202ENST00000393158 AGMOQ6ZNB7 445 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 RRAGAQ7L523 313 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 MRPL10Q7Z7H8 261 aaKnown RBP11.67□□□□□ -0.54
PDGFD-202ENST00000393158 DRC7Q8IY82 874 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 WHAMMQ8TF30 809 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 PPP1R10Q96QC0 940 aaKnown RBP11.67□□□□□ -0.54
PDGFD-202ENST00000393158 VRTNQ9H8Y1 702 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 PADI3Q9ULW8 664 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 LDHAP00338 332 aaKnown RBP11.67□□□□□ -0.54
PDGFD-202ENST00000393158 CTSHP09668 335 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 TRAPPC11Q7Z392 1133 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 ACRBPQ8NEB7 543 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
PDGFD-202ENST00000393158 PPP1R13BQ96KQ4 1090 aa11.67□□□□□ -0.54
PDGFD-202ENST00000393158 HSPA1AP0DMV8 641 aaKnown RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 HSPA1BP0DMV9 641 aaKnown RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 GNAT1P11488 350 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 TRIM21P19474 475 aaKnown RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 AKAP5P24588 427 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 CD52P31358 61 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 CDC42EP1Q00587 391 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 CTU1Q7Z7A3 348 aaKnown RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 FBXL13Q8NEE6 735 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 C18orf25Q96B23 403 aaPredicted RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 STK33Q9BYT3 514 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 BCO2Q9BYV7 579 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 NHEJ1Q9H9Q4 299 aaPredicted RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 TUBGCP4Q9UGJ1 667 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 MYO6Q9UM54 1294 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 HLA-DRAP01903 254 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 FKBP15Q5T1M5 1219 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 SLC39A5Q6ZMH5 540 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 LACRTQ9GZZ8 138 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 LUC7L2Q9Y383 392 aaKnown RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 SPTLC1O15269 473 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 MYCP01106 439 aaPredicted RBP11.66□□□□□ -0.54
PDGFD-202ENST00000393158 THPOP40225 353 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 CACNG4Q9UBN1 327 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 DNAJC12Q9UKB3 198 aa11.66□□□□□ -0.54
PDGFD-202ENST00000393158 ARHGAP6O43182 974 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 TPM3P06753 285 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 CLTAP09496 248 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 HARSP12081 509 aaKnown RBP11.65□□□□□ -0.54
PDGFD-202ENST00000393158 KCNE1P15382 129 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 AXLP30530 894 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 MYL6P60660 151 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 GCNT1Q02742 428 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 DRAP1Q14919 205 aaPredicted RBP11.65□□□□□ -0.54
PDGFD-202ENST00000393158 NOTUMQ6P988 496 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
PDGFD-202ENST00000393158 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 STARD7Q9NQZ5 370 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 TBX21Q9UL17 535 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 DUSP10Q9Y6W6 482 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 A0A087X0T9 212 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 DDX3XO00571 662 aaKnown RBP eCLIP11.65□□□□□ -0.54
PDGFD-202ENST00000393158 CAND2O75155 1236 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 RECQL4O94761 1208 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 FAM228BP0C875 321 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 C3orf58Q8NDZ4 430 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 SLC20A1Q8WUM9 679 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 ZFP42Q96MM3 310 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 PCDHB18PQ96TA0 734 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.54
PDGFD-202ENST00000393158 SPC25Q9HBM1 224 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 HMGXB4Q9UGU5 601 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 GINS2Q9Y248 185 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 SQORQ9Y6N5 450 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 TNNT1P13805 278 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 FAM189BP81408 668 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF662Q6ZS27 426 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 GLT1D1Q96MS3 346 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 HAUS4Q9H6D7 363 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 C2CD2Q9Y426 696 aa11.65□□□□□ -0.54
PDGFD-202ENST00000393158 PIRO00625 290 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 NDUFA10O95299 355 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 LRRC26Q2I0M4 334 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 EP400NLQ6ZTU2 488 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 NOP9Q86U38 636 aaKnown RBP11.64□□□□□ -0.55
PDGFD-202ENST00000393158 SLC47A2Q86VL8 602 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 PAAF1Q9BRP4 392 aa11.64□□□□□ -0.55
PDGFD-202ENST00000393158 TAS2R14Q9NYV8 317 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms