RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 RUNDC3BQ96NL0 473 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 UNCXA6NJT0 531 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 OGTO15294 1046 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 ASAP2O43150 1006 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 DAPK3O43293 454 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 HBP1O60381 514 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 PYGMP11217 842 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 PROZP22891 400 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 NOP14P78316 857 aaKnown RBP15.29■□□□□ 0.04
MKS1-203ENST00000393120 SNAPC2Q13487 334 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 NCOA4Q13772 614 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 EMC10Q5UCC4 262 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 TSHZ1Q6ZSZ6 1077 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 DDX42Q86XP3 938 aaKnown RBP eCLIP15.29■□□□□ 0.04
MKS1-203ENST00000393120 UBR7Q8N806 425 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 PRELID2Q8N945 189 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 CELF4Q9BZC1 486 aaKnown RBP15.29■□□□□ 0.04
MKS1-203ENST00000393120 ERVK-5Q9HDB9 667 aa15.29■□□□□ 0.04
MKS1-203ENST00000393120 CHORDC1Q9UHD1 332 aaPredicted RBP15.29■□□□□ 0.04
MKS1-203ENST00000393120 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
MKS1-203ENST00000393120 FAM170AA1A519 330 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 A6NNZ2 444 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 SHOX2O60902 331 aaPredicted RBP15.28■□□□□ 0.04
MKS1-203ENST00000393120 ASS1P00966 412 aaKnown RBP15.28■□□□□ 0.04
MKS1-203ENST00000393120 PRKCBP05771 671 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 GBP1P32455 592 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 PTGIRP43119 386 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 NSFP46459 744 aaKnown RBP15.28■□□□□ 0.04
MKS1-203ENST00000393120 MTMR3Q13615 1198 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 TFDP1Q14186 410 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 TUBB8Q3ZCM7 444 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 NAA35Q5VZE5 725 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 SPOPLQ6IQ16 392 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 MON1BQ7L1V2 547 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 PHF13Q86YI8 300 aaPredicted RBP15.28■□□□□ 0.04
MKS1-203ENST00000393120 SLC13A5Q86YT5 568 aaPredicted RBP15.28■□□□□ 0.04
MKS1-203ENST00000393120 RNF149Q8NC42 400 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 FZD8Q9H461 694 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 PTPRHQ9HD43 1115 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 RASAL2Q9UJF2 1139 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 CPSF3Q9UKF6 684 aaKnown RBP15.28■□□□□ 0.04
MKS1-203ENST00000393120 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 NUB1Q9Y5A7 615 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 PCDHB4Q9Y5E5 795 aa15.28■□□□□ 0.04
MKS1-203ENST00000393120 TTLL13PA6NNM8 815 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 ACKR2O00590 384 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 PODXLO00592 558 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 SRGAP2CP0DJJ0 459 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 TXNP10599 105 aaKnown RBP15.27■□□□□ 0.04
MKS1-203ENST00000393120 MARK3P27448 753 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 MAPK4P31152 587 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 ZNF132P52740 706 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 POU5F1BQ06416 359 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 PTP4A2Q12974 167 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 TTMPQ5BVD1 217 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 FBXO16Q8IX29 292 aaPredicted RBP15.27■□□□□ 0.04
MKS1-203ENST00000393120 C12orf50Q8NA57 414 aaPredicted RBP15.27■□□□□ 0.04
MKS1-203ENST00000393120 ARL8AQ96BM9 186 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 BTBD6Q96KE9 485 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 NFKBIZQ9BYH8 718 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 IMPG2Q9BZV3 1241 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 NEUROG2Q9H2A3 272 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 PNMA3Q9UL41 463 aa15.27■□□□□ 0.04
MKS1-203ENST00000393120 FSCN2O14926 492 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 YBX3P16989 372 aaKnown RBP eCLIP15.27■□□□□ 0.039e-6■□□□□ 10.4
MKS1-203ENST00000393120 RRM1P23921 792 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 HSD17B3P37058 310 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 DUOXA2Q1HG44 320 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 LIN9Q5TKA1 542 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 AADACL2Q6P093 401 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 TMEM270Q6UE05 265 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 TRIM50Q86XT4 487 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 JAMLQ86YT9 394 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 ZDHHC14Q8IZN3 488 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 RBBP8NLQ8NC74 664 aaPredicted RBP15.27■□□□□ 0.03
MKS1-203ENST00000393120 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 CYFIP2Q96F07 1278 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 SYT17Q9BSW7 474 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 ANAPC7Q9UJX3 599 aa15.27■□□□□ 0.03
MKS1-203ENST00000393120 MROH7Q68CQ1 1323 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 H0YGN5 161 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 CALCAP01258 141 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 GNA15P30679 374 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 TNFSF9P41273 254 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 NOMO3P69849 1222 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 SKOR1P84550 965 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
MKS1-203ENST00000393120 SGSM1Q2NKQ1 1148 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 MPZL3Q6UWV2 235 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 TMC3Q7Z5M5 1100 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 MAGOHBQ96A72 148 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms