RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 PCNX4Q63HM2 1172 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 NOA1Q8NC60 698 aaKnown RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 ERP44Q9BS26 406 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 TARS2Q9BW92 718 aaKnown RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 OLFML3Q9NRN5 406 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 PPP1R9AQ9ULJ8 1098 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 PI4K2BG5E9Z4 385 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 MAP3K7O43318 606 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 LCP1P13796 627 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 GARTP22102 1010 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 BACE1P56817 501 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 ACAD11Q709F0 780 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 GTPBP10A4D1E9 387 aaKnown RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 RRN3P2A6NIE6 340 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 HAUS5O94927 633 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 FKBP1AP62942 108 aaKnown RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 EFCAB12Q6NXP0 572 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 RBM15Q96T37 977 aaKnown RBP eCLIP13.33□□□□□ -0.282e-7■■□□□ 14
CLTC-202ENST00000393043 ROPN1BQ9BZX4 212 aaPredicted RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 ROPN1Q9HAT0 212 aaPredicted RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 TPX2Q9ULW0 747 aaKnown RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 A0A087X0T9 212 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 RSPH10B2B2RC85 870 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 DYNC1LI2O43237 492 aaPredicted RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 FAM228BP0C875 321 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 RSPH10BP0C881 870 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 ARP10275 920 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 HSD17B4P51659 736 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 P3H1Q32P28 736 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 ACAD10Q6JQN1 1059 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 ILDR1Q86SU0 546 aaPredicted RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 TTC8Q8TAM2 541 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 TRIM33Q9UPN9 1127 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 CETPP11597 493 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 ACADSBP45954 432 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 ARFIP2P53365 341 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 PID1Q7Z2X4 250 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 FEZF2Q8TBJ5 459 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 SCFD1Q8WVM8 642 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 FNDC3AQ9Y2H6 1198 aaKnown RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 TRAPPC3O43617 180 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 NAMPTP43490 491 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 NUDCD3Q8IVD9 361 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 ALKBH8Q96BT7 664 aaKnown RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 TRPV6Q9H1D0 765 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 RSAD1Q9HA92 442 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 THEGQ9P2T0 379 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 PLEKP08567 350 aaPredicted RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 PGBD4Q96DM1 585 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 IDI2Q9BXS1 227 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 EPN3Q9H201 632 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 SLC38A7Q9NVC3 462 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 NOP53Q9NZM5 478 aaKnown RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 CFAP73A6NFT4 308 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 TCF7P36402 384 aaPredicted RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 TGFB2P61812 414 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 HP1BP3Q5SSJ5 553 aaPredicted RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 PAPD7Q5XG87 772 aaKnown RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
CLTC-202ENST00000393043 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
CLTC-202ENST00000393043 KCNN4O15554 427 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 MAPTP10636 758 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 FNTAP49354 379 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 SATB1Q01826 763 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 CDR2Q01850 454 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 OCRLQ01968 901 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 GUCY1A3Q02108 690 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 CUL2Q13617 745 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 TAF11Q15544 211 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 WDR93Q6P2C0 686 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 GJB7Q6PEY0 223 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 UPF3AQ9H1J1 476 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 TRABDQ9H4I3 376 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 DBR1Q9UK59 544 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 SPAG6O75602 509 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 DRP2Q13474 957 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 GPAT2Q6NUI2 795 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 SP110Q9HB58 689 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 NEU2Q9Y3R4 380 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 SUPT20HL2P0C7V6 817 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 GZMAP12544 262 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 SULT1E1P49888 294 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 TPI1P60174 286 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 TSTA3Q13630 321 aaPredicted RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 R3HDM1Q15032 1099 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 RASSF3Q86WH2 238 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 VPS33BQ9H267 617 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms