RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 CENPPQ6IPU0 288 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 RASSF3Q86WH2 238 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 UBA3Q8TBC4 463 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 DHX38Q92620 1227 aaKnown RBP17.53■□□□□ 0.4
SCN3B-202ENST00000392770 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 IFT43Q96FT9 208 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 SIK2Q9H0K1 926 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 FAM49BQ9NUQ9 324 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 CHORDC1Q9UHD1 332 aaPredicted RBP17.53■□□□□ 0.4
SCN3B-202ENST00000392770 CDK17Q00537 523 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 SPATC1LQ9H0A9 340 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 RRP15Q9Y3B9 282 aaKnown RBP17.52■□□□□ 0.4
SCN3B-202ENST00000392770 SGPL1O95470 568 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 DCAF4L1Q3SXM0 396 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 ATG16L1Q676U5 607 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 CFAP61Q8NHU2 1237 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 HPDLQ96IR7 371 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 DFFAO00273 331 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 SOX10P56693 466 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 SPARCL1Q14515 664 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 SRRM1Q8IYB3 904 aaKnown RBP17.52■□□□□ 0.4
SCN3B-202ENST00000392770 TTC17Q96AE7 1141 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 TRIM62Q9BVG3 475 aa17.52■□□□□ 0.4
SCN3B-202ENST00000392770 BAG2O95816 211 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 KIAA1755Q5JYT7 1200 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 NUGGCQ68CJ6 796 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 SYDE1Q6ZW31 735 aaPredicted RBP17.52■□□□□ 0.39
SCN3B-202ENST00000392770 PLEKHA5Q9HAU0 1116 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.52■□□□□ 0.39
SCN3B-202ENST00000392770 CTIFO43310 598 aaKnown RBP17.52■□□□□ 0.39
SCN3B-202ENST00000392770 RGS2P41220 211 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 CLCN3P51790 818 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 FCGRTP55899 365 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 OTOP1Q7RTM1 612 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 TRAPPC11Q7Z392 1133 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 MAML1Q92585 1016 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 ATP6V1E2Q96A05 226 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 MRIQ9BWK5 157 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 THAP2Q9H0W7 228 aa17.52■□□□□ 0.39
SCN3B-202ENST00000392770 COG1Q8WTW3 980 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 GOLPH3Q9H4A6 298 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 SLITRK3O94933 977 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 NR1H3Q13133 447 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 MUM1Q2TAK8 710 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 CYP4A22Q5TCH4 519 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 POP1Q99575 1024 aaKnown RBP17.51■□□□□ 0.39
SCN3B-202ENST00000392770 PPP1R12CQ9BZL4 782 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 SLC38A7Q9NVC3 462 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 ADAM21Q9UKJ8 722 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 HPCAL4Q9UM19 191 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 PPP2R2AP63151 447 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 LY6KQ17RY6 165 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 DPP3Q9NY33 737 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 PLAGL2Q9UPG8 496 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 ZBBXA8MT70 800 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 CACNB2Q08289 660 aaPredicted RBP17.51■□□□□ 0.39
SCN3B-202ENST00000392770 FKBP1CQ5VVH2 108 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 SP110Q9HB58 689 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 GRAP2O75791 330 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 KRT38O76015 456 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 APOEP02649 317 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 GNASQ5JWF2 1037 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 SH2D4BQ5SQS7 431 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 ATP6V1G3Q96LB4 118 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 INTUQ9ULD6 942 aa17.51■□□□□ 0.39
SCN3B-202ENST00000392770 GOLGA8QA0A0J9YX86 632 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 GOLGA8OA6NCC3 632 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 GOLGA8NF8WBI6 632 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 KCNN4O15554 427 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
SCN3B-202ENST00000392770 SESN3P58005 492 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 TAF1BQ53T94 588 aaPredicted RBP17.5■□□□□ 0.39
SCN3B-202ENST00000392770 ITPRIPL1Q6GPH6 555 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 ACAD10Q6JQN1 1059 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 KLC3Q6P597 504 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 MPZL3Q6UWV2 235 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 MKL1Q969V6 931 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 MID2Q9UJV3 735 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
SCN3B-202ENST00000392770 RALAP11233 206 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 STX1BP61266 288 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 CPB2Q96IY4 423 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 MED15Q96RN5 788 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 MTMR12Q9C0I1 747 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 GBA2Q9HCG7 927 aaPredicted RBP17.5■□□□□ 0.39
SCN3B-202ENST00000392770 METTL5Q9NRN9 209 aaKnown RBP17.5■□□□□ 0.39
SCN3B-202ENST00000392770 SLC8A2Q9UPR5 921 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 AKAP3O75969 853 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 VTNP04004 478 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 OAZ1P54368 228 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 HERVK_113P62684 666 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 P3H1Q32P28 736 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 CRY2Q49AN0 593 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 ELAC2Q9BQ52 826 aaKnown RBP17.5■□□□□ 0.39
SCN3B-202ENST00000392770 TPI1P60174 286 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 PPM1NQ8N819 430 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 TPCN2Q8NHX9 752 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 GARTP22102 1010 aa17.5■□□□□ 0.39
SCN3B-202ENST00000392770 MYLK4Q86YV6 388 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms