RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ANKRD36BP1Q96IX9 119 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 ADPGKQ9BRR6 497 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 CFHR5Q9BXR6 569 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 ASB7Q9H672 318 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TAS2R14Q9NYV8 317 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 CNTN6Q9UQ52 1028 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 C17orf102A2RUQ5 167 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TMCO5BA8MYB1 307 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 RTN2O75298 545 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 CST3P01034 146 aaPredicted RBP12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 C6orf222P0C671 652 aaPredicted RBP12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 GNAT1P11488 350 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TCP1P17987 556 aaKnown RBP12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TFAMQ00059 246 aaKnown RBP12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 DCAF4L1Q3SXM0 396 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 ZNF677Q86XU0 584 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 RFFLQ8WZ73 363 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 PCDHB18PQ96TA0 734 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 TLR10Q9BXR5 811 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 HYOU1Q9Y4L1 999 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 PCDHB2Q9Y5E7 798 aa12.29□□□□□ -0.44
SMARCAL1-203ENST00000392128 MYADML2A6NDP7 307 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 SEPT4O43236 478 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TREHO43280 583 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TFRCP02786 760 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 MMEP08473 750 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 SP3Q02447 781 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 CKAP4Q07065 602 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TRPC3Q13507 836 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 MEI1Q5TIA1 1274 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 APBB1IPQ7Z5R6 666 aaPredicted RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 UBR7Q8N806 425 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 LRRC57Q8N9N7 239 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TPCN2Q8NHX9 752 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 CALR3Q96L12 384 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 ACP6Q9NPH0 428 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 PUF60Q9UHX1 559 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 LACTBL1A8MY62 500 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 MEFVO15553 781 aaPredicted RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 MYL6P60660 151 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TMEM62Q0P6H9 643 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TAF3Q5VWG9 929 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 SLFN11Q7Z7L1 901 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 CTAGE6Q86UF2 777 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 NME8Q8N427 588 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 C7orf31Q8N865 590 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 IPO4Q8TEX9 1081 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 PPP1R13LQ8WUF5 828 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 DNAJB3Q8WWF6 145 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 RABGGTAQ92696 567 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 TAF4BQ92750 862 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 OSBPL9Q96SU4 736 aa12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 MTG1Q9BT17 334 aaPredicted RBP12.28□□□□□ -0.44
SMARCAL1-203ENST00000392128 UMODL1Q5DID0 1318 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 FTLP02792 175 aaPredicted RBP12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 NFICP08651 508 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 ABCB4P21439 1286 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 EIF4BP23588 611 aaKnown RBP12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 HOXA11P31270 313 aaPredicted RBP12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 GRM5P41594 1212 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 HADHBP55084 474 aaKnown RBP12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 SLC10A6Q3KNW5 377 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 GNASQ5JWF2 1037 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 SCARA3Q6AZY7 606 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 CATSPER4Q7RTX7 472 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 SLC35G2Q8TBE7 412 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 FAXDC2Q96IV6 333 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 OSMRQ99650 979 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 NIF3L1Q9GZT8 377 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 THAP2Q9H0W7 228 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 SPC25Q9HBM1 224 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 PRDM4Q9UKN5 801 aa12.27□□□□□ -0.44
SMARCAL1-203ENST00000392128 MROH7Q68CQ1 1323 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 NCK2O43639 380 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 RARBP10826 455 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 FGFR4P22455 802 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 AXLP30530 894 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 CAP1Q01518 475 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 JADE1Q6IE81 842 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 NT5DC4Q86YG4 428 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 CREG2Q8IUH2 290 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 CD302Q8IX05 232 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 RHOT2Q8IXI1 618 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 SYCE1Q8N0S2 351 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 ACAP3Q96P50 834 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 GINS2Q9Y248 185 aa12.27□□□□□ -0.45
SMARCAL1-203ENST00000392128 PCDHB4Q9Y5E5 795 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms