RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SNTG2Q9NY99 539 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 FRMPD3Q5JV73 1810 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 KIF5CO60282 957 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 KRT5P13647 590 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 GUCY2FP51841 1108 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 NOP14P78316 857 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 SLC47A2Q86VL8 602 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 PALB2Q86YC2 1186 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 SLC35F6Q8N357 371 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 APOL6Q9BWW8 343 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 NXF3Q9H4D5 531 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 MROH7Q68CQ1 1323 aa13.12□□□□□ -0.31
SPTBN1-203ENST00000389980 TMCO5BA8MYB1 307 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 ZC3H11AO75152 810 aaKnown RBP eCLIP13.11□□□□□ -0.312e-8■■■■■ 34.5
SPTBN1-203ENST00000389980 IL18RAPO95256 599 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 CHRNA1P02708 482 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 GCNT1Q02742 428 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 KIF5AQ12840 1032 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 U2AF1L4Q8WU68 220 aaKnown RBP13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 ANKRD36BP1Q96IX9 119 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 SYT11Q9BT88 431 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.11□□□□□ -0.313e-7■□□□□ 8.1
SPTBN1-203ENST00000389980 SALL4Q9UJQ4 1053 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 NAGPAQ9UK23 515 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 V9GYY5 206 aaPredicted RBP13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 KRT86O43790 486 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 TNNC2P02585 160 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 KRT19P08727 400 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 AKAP5P24588 427 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 THPOP40225 353 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 GRM5P41594 1212 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 AP3M2P53677 418 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 TRPC3Q13507 836 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 ALKBH5Q6P6C2 394 aaKnown RBP13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 TRIM6Q9C030 488 aaPredicted RBP13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 SIX4Q9UIU6 781 aa13.11□□□□□ -0.31
SPTBN1-203ENST00000389980 M0QZ92 97 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 CTIFO43310 598 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 ASS1P00966 412 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 CCDC172P0C7W6 258 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 CASQ1P31415 396 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 CUL2Q13617 745 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 NOP9Q86U38 636 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 RSPH3Q86UC2 560 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 SESTD1Q86VW0 696 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 SLC30A5Q8TAD4 765 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 AGPAT1Q99943 283 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 TAS2R14Q9NYV8 317 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 TRPV2Q9Y5S1 764 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 ITGB3P05106 788 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 TNFAIP3P21580 790 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 NFX1Q12986 1120 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 UBXN11Q5T124 520 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 SCARA5Q6ZMJ2 495 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 EPS8L1Q8TE68 723 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 IMPG2Q9BZV3 1241 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 SENP6Q9GZR1 1112 aaPredicted RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 ASB7Q9H672 318 aa13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 NOCTQ9UK39 431 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-203ENST00000389980 SCN1AP35498 2009 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 BUB1O43683 1085 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 MOCS3O95396 460 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 CHRNB2P17787 502 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 PRMT2P55345 433 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 PCBP1Q15365 356 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 MTFR1Q15390 333 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 NAB2Q15742 525 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 ZNF699Q32M78 642 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 GLRA4Q5JXX5 417 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 GLT1D1Q96MS3 346 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 TRPV6Q9H1D0 765 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 KLK14Q9P0G3 267 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
SPTBN1-203ENST00000389980 POLIQ9UNA4 740 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms