RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 XAB2Q9HCS7 855 aaKnown RBP15.06■□□□□ 0
RTF1-201ENST00000389629 MYO3BQ8WXR4 1341 aa15.06■□□□□ 0
RTF1-201ENST00000389629 NFAT5O94916 1531 aa15.06■□□□□ 0
RTF1-201ENST00000389629 SGPL1O95470 568 aa15.06■□□□□ 0
RTF1-201ENST00000389629 ATXN3P54252 364 aaPredicted RBP15.06■□□□□ 0
RTF1-201ENST00000389629 SLC30A10Q6XR72 485 aa15.06■□□□□ 0
RTF1-201ENST00000389629 EIF1ADQ8N9N8 165 aaKnown RBP15.06■□□□□ 0
RTF1-201ENST00000389629 SCFD2Q8WU76 684 aa15.06■□□□□ 0
RTF1-201ENST00000389629 EPS15L1Q9UBC2 864 aa15.06■□□□□ 0
RTF1-201ENST00000389629 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.06■□□□□ 0
RTF1-201ENST00000389629 SRRM3A6NNA2 597 aaPredicted RBP15.06■□□□□ 0
RTF1-201ENST00000389629 MIGA2Q7L4E1 593 aa15.06■□□□□ 0
RTF1-201ENST00000389629 DCLK2Q8N568 766 aa15.06■□□□□ 0
RTF1-201ENST00000389629 DNAJC19Q96DA6 116 aa15.06■□□□□ 0
RTF1-201ENST00000389629 GANQ9H2C0 597 aa15.06■□□□□ 0
RTF1-201ENST00000389629 RNPEPL1Q9HAU8 725 aa15.06■□□□□ 0
RTF1-201ENST00000389629 PSMC3IPQ9P2W1 217 aaPredicted RBP15.06■□□□□ 0
RTF1-201ENST00000389629 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
RTF1-201ENST00000389629 MSH4O15457 936 aa15.06■□□□□ 0
RTF1-201ENST00000389629 ENTPD5O75356 428 aa15.06■□□□□ 0
RTF1-201ENST00000389629 TMEM191BP0C7N4 346 aa15.06■□□□□ 0
RTF1-201ENST00000389629 EPHA7Q15375 998 aa15.06■□□□□ 0
RTF1-201ENST00000389629 CNGA2Q16280 664 aa15.06■□□□□ 0
RTF1-201ENST00000389629 SCARA5Q6ZMJ2 495 aa15.06■□□□□ 0
RTF1-201ENST00000389629 CCT6BQ92526 530 aa15.06■□□□□ 0
RTF1-201ENST00000389629 PCSK1NQ9UHG2 260 aa15.06■□□□□ 0
RTF1-201ENST00000389629 ATXN2Q99700 1313 aaKnown RBP15.05■□□□□ 0
RTF1-201ENST00000389629 EIF3DO15371 548 aaKnown RBP eCLIP15.05■□□□□ 0
RTF1-201ENST00000389629 FNTAP49354 379 aa15.05■□□□□ 0
RTF1-201ENST00000389629 PDZD8Q8NEN9 1154 aa15.05■□□□□ 0
RTF1-201ENST00000389629 DEPDC1BQ8WUY9 529 aa15.05■□□□□ 0
RTF1-201ENST00000389629 NEUROG2Q9H2A3 272 aa15.05■□□□□ 0
RTF1-201ENST00000389629 CHD2O14647 1828 aaKnown RBP15.05■□□□□ 0
RTF1-201ENST00000389629 AFDNP55196 1824 aaKnown RBP15.05■□□□□ 0
RTF1-201ENST00000389629 SUPT3HO75486 399 aa15.05■□□□□ 0
RTF1-201ENST00000389629 NCALDP61601 193 aa15.05■□□□□ 0
RTF1-201ENST00000389629 CEP55Q53EZ4 464 aa15.05■□□□□ 0
RTF1-201ENST00000389629 WWP1Q9H0M0 922 aa15.05■□□□□ 0
RTF1-201ENST00000389629 MANSC1Q9H8J5 431 aa15.05■□□□□ 0
RTF1-201ENST00000389629 SLIT3O75094 1523 aa15.05■□□□□ -0
RTF1-201ENST00000389629 RALAP11233 206 aa15.05■□□□□ -0
RTF1-201ENST00000389629 KCNA1Q09470 495 aa15.05■□□□□ -0
RTF1-201ENST00000389629 IZUMO2Q6UXV1 221 aa15.05■□□□□ -0
RTF1-201ENST00000389629 ARHGAP22Q7Z5H3 698 aa15.05■□□□□ -0
RTF1-201ENST00000389629 RBBP8NLQ8NC74 664 aaPredicted RBP15.05■□□□□ -0
RTF1-201ENST00000389629 LINC00116Q8NCU8 138 aa15.05■□□□□ -0
RTF1-201ENST00000389629 NXF1Q9UBU9 619 aaKnown RBP15.05■□□□□ -0
RTF1-201ENST00000389629 ARHGAP10A1A4S6 786 aa15.05■□□□□ -0
RTF1-201ENST00000389629 H0YCG3 227 aa15.05■□□□□ -0
RTF1-201ENST00000389629 GPC4O75487 556 aa15.05■□□□□ -0
RTF1-201ENST00000389629 P4HBP07237 508 aaKnown RBP15.05■□□□□ -0
RTF1-201ENST00000389629 GSTA2P09210 222 aa15.05■□□□□ -0
RTF1-201ENST00000389629 CNGA3Q16281 694 aa15.05■□□□□ -0
RTF1-201ENST00000389629 MTERF2Q49AM1 385 aa15.05■□□□□ -0
RTF1-201ENST00000389629 SYDE1Q6ZW31 735 aaPredicted RBP15.05■□□□□ -0
RTF1-201ENST00000389629 ATXN2LQ8WWM7 1075 aaKnown RBP15.05■□□□□ -0
RTF1-201ENST00000389629 SCG3Q8WXD2 468 aaKnown RBP15.05■□□□□ -0
RTF1-201ENST00000389629 LOC100653049A0A140TA62 436 aa15.04■□□□□ -0
RTF1-201ENST00000389629 GMNNO75496 209 aa15.04■□□□□ -0
RTF1-201ENST00000389629 KRT34O76011 436 aa15.04■□□□□ -0
RTF1-201ENST00000389629 TTC4O95801 387 aa15.04■□□□□ -0
RTF1-201ENST00000389629 PSMA2P25787 234 aa15.04■□□□□ -0
RTF1-201ENST00000389629 RAPH1Q70E73 1250 aa15.04■□□□□ -0
RTF1-201ENST00000389629 ATP6V0A1Q93050 837 aa15.04■□□□□ -0
RTF1-201ENST00000389629 SHISA4Q96DD7 197 aa15.04■□□□□ -0
RTF1-201ENST00000389629 SERPINI1Q99574 410 aa15.04■□□□□ -0
RTF1-201ENST00000389629 OSBPL8Q9BZF1 889 aa15.04■□□□□ -0
RTF1-201ENST00000389629 KPNB1Q14974 876 aaKnown RBP15.04■□□□□ -0
RTF1-201ENST00000389629 DAB2IPQ5VWQ8 1189 aa15.04■□□□□ -0
RTF1-201ENST00000389629 C3orf62Q6ZUJ4 267 aa15.04■□□□□ -0
RTF1-201ENST00000389629 KRT35Q92764 455 aa15.04■□□□□ -0
RTF1-201ENST00000389629 FGFBP2Q9BYJ0 223 aa15.04■□□□□ -0
RTF1-201ENST00000389629 CNOT7Q9UIV1 285 aaKnown RBP15.04■□□□□ -0
RTF1-201ENST00000389629 F5H423 210 aaPredicted RBP15.04■□□□□ -0
RTF1-201ENST00000389629 LCA5LO95447 670 aa15.04■□□□□ -0
RTF1-201ENST00000389629 NDUFB10O96000 172 aa15.04■□□□□ -0
RTF1-201ENST00000389629 PYGMP11217 842 aa15.04■□□□□ -0
RTF1-201ENST00000389629 EEF1B2P24534 225 aaKnown RBP15.04■□□□□ -0
RTF1-201ENST00000389629 PTPN4P29074 926 aa15.04■□□□□ -0
RTF1-201ENST00000389629 APOL6Q9BWW8 343 aa15.04■□□□□ -0
RTF1-201ENST00000389629 CORO1CQ9ULV4 474 aaPredicted RBP15.04■□□□□ -0
RTF1-201ENST00000389629 PPIP5K2O43314 1243 aa15.04■□□□□ -0
RTF1-201ENST00000389629 CRCPO75575 148 aa15.04■□□□□ -0
RTF1-201ENST00000389629 KRT38O76015 456 aa15.04■□□□□ -0
RTF1-201ENST00000389629 GNA15P30679 374 aa15.04■□□□□ -0
RTF1-201ENST00000389629 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
RTF1-201ENST00000389629 AUHQ13825 339 aaKnown RBP15.04■□□□□ -0
RTF1-201ENST00000389629 CENPTQ96BT3 561 aa15.04■□□□□ -0
RTF1-201ENST00000389629 RTFDC1Q9BY42 306 aaPredicted RBP15.04■□□□□ -0
RTF1-201ENST00000389629 MRPL46Q9H2W6 279 aaKnown RBP15.04■□□□□ -0
RTF1-201ENST00000389629 KCNG1Q9UIX4 513 aa15.04■□□□□ -0
RTF1-201ENST00000389629 LRCH1Q9Y2L9 728 aa15.04■□□□□ -0
RTF1-201ENST00000389629 MRC1P22897 1456 aa15.03■□□□□ -0
RTF1-201ENST00000389629 NID2Q14112 1375 aa15.03■□□□□ -0
RTF1-201ENST00000389629 TFAMQ00059 246 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 DSG1Q02413 1049 aa15.03■□□□□ -0
RTF1-201ENST00000389629 CDO1Q16878 200 aa15.03■□□□□ -0
RTF1-201ENST00000389629 IRF2BP2Q7Z5L9 587 aa15.03■□□□□ -0
RTF1-201ENST00000389629 ARID3BQ8IVW6 561 aaPredicted RBP15.03■□□□□ -0
RTF1-201ENST00000389629 MFN1Q8IWA4 741 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms