RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 NOTCH4Q99466 2003 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 ARHGEF37A1IGU5 675 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 GIPC1O14908 333 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 N4BP3O15049 544 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 TRAPPC3O43617 180 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 CCNT1O60563 726 aaKnown RBP10.65□□□□□ -0.7
IFT88-203ENST00000389373 RPP40O75818 363 aaKnown RBP10.65□□□□□ -0.7
IFT88-203ENST00000389373 SEC24AO95486 1093 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 IFNAR1P17181 557 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 ARL2P36404 184 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 CLCNKBP51801 687 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 ROR1Q01973 937 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 PON2Q15165 354 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 PPP4R3AQ6IN85 833 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 CACNA2D4Q7Z3S7 1137 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 KBTBD6Q86V97 674 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 MFSD6LQ8IWD5 586 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 ZNF461Q8TAF7 563 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 ADPGKQ9BRR6 497 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 C8orf33Q9H7E9 229 aaPredicted RBP10.65□□□□□ -0.7
IFT88-203ENST00000389373 GOLGA2P5Q9HBQ8 144 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 TRPV5Q9NQA5 729 aa10.65□□□□□ -0.7
IFT88-203ENST00000389373 PRMT7Q9NVM4 692 aaPredicted RBP10.65□□□□□ -0.7
IFT88-203ENST00000389373 CCDC194A0A1B0GVG4 234 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 USO1O60763 962 aaKnown RBP10.64□□□□□ -0.71
IFT88-203ENST00000389373 DGAT1O75907 488 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 SLITRK3O94933 977 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 EPN2O95208 641 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 BAG4O95429 457 aaKnown RBP10.64□□□□□ -0.71
IFT88-203ENST00000389373 TOP3BO95985 862 aaKnown RBP10.64□□□□□ -0.71
IFT88-203ENST00000389373 PRKCBP05771 671 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 ZNF252P-AS1Q0IIN9 211 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 TWF1Q12792 350 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 TEAD2Q15562 447 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 NAB2Q15742 525 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 DGKKQ5KSL6 1271 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 TCEAL6Q6IPX3 200 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 KRT25Q7Z3Z0 450 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 ZBTB8OSQ8IWT0 167 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 PIGOQ8TEQ8 1089 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 TCEAL3Q969E4 200 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 JAKMIP1Q96N16 626 aaKnown RBP10.64□□□□□ -0.71
IFT88-203ENST00000389373 EIF2AK1Q9BQI3 630 aaKnown RBP10.64□□□□□ -0.71
IFT88-203ENST00000389373 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 KCNMB3Q9NPA1 279 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 GPRC5CQ9NQ84 441 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 LHX6Q9UPM6 363 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 INSL5Q9Y5Q6 135 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 ZMYM2Q9UBW7 1377 aa10.64□□□□□ -0.71
IFT88-203ENST00000389373 NCANO14594 1321 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 C4orf47A7E2U8 309 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 SPECC1L-ADORA2AF8WAN1 911 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 M0R2N6 131 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 DPYSL4O14531 572 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 EXTL3O43909 919 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 MOSPD3O75425 235 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 MICAL2O94851 1124 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 ABLIM3O94929 683 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 PAPSS2O95340 614 aaPredicted RBP10.63□□□□□ -0.71
IFT88-203ENST00000389373 ATF2P15336 505 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 MPLP40238 635 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 PRPF4BQ13523 1007 aaKnown RBP10.63□□□□□ -0.71
IFT88-203ENST00000389373 WDR44Q5JSH3 913 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 TXNDC11Q6PKC3 985 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 LRSAM1Q6UWE0 723 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 CD300LGQ6UXG3 332 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 NEK8Q86SG6 692 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 KDF1Q8NAX2 398 aaPredicted RBP10.63□□□□□ -0.71
IFT88-203ENST00000389373 GAB3Q8WWW8 586 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 HAS1Q92839 578 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 LOXL4Q96JB6 756 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 ZFYVE19Q96K21 471 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 AIFM3Q96NN9 605 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 EDEM2Q9BV94 578 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 NFKBIZQ9BYH8 718 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 ASAH2Q9NR71 780 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 ANKEF1Q9NU02 776 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 CEP72Q9P209 647 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 KCNJ14Q9UNX9 436 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 SLC8A2Q9UPR5 921 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 BAHCC1Q9P281 2608 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 USP24Q9UPU5 2620 aa10.63□□□□□ -0.71
IFT88-203ENST00000389373 TICRRQ7Z2Z1 1910 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 SRRM3A6NNA2 597 aaPredicted RBP10.62□□□□□ -0.71
IFT88-203ENST00000389373 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 H7C4K7 107 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 TMEM189-UBE2V1I3L0A0 370 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 CHADO15335 359 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 PDIA3P30101 505 aaKnown RBP10.62□□□□□ -0.71
IFT88-203ENST00000389373 CTHP32929 405 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 RAP1GAPP47736 663 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 RING1Q06587 406 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 UPP1Q16831 310 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 CTXN3Q4LDR2 81 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 EEF1DP3Q658K8 133 aa10.62□□□□□ -0.71
IFT88-203ENST00000389373 SLC8B1Q6J4K2 584 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms