RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 LIN28AQ9H9Z2 209 aaKnown RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PREBQ9HCU5 417 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 HPF1Q9NWY4 346 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 MCM9Q9NXL9 1143 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 UTP6Q9NYH9 597 aaKnown RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 TUBD1Q9UJT1 453 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PCDHA11Q9Y5I1 949 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 ZNF831Q5JPB2 1677 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 LCHNA4D1U4 455 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 B4E1Z4 1266 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 TGM5O43548 720 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 SRGAP2O75044 1071 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 PTP4A3O75365 173 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 STAM2O75886 525 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ENDOD1O94919 500 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 MMP10P09238 476 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 BCRP11274 1271 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 PCP11498 1178 aaKnown RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 DPEP1P16444 411 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ALDH9A1P49189 494 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 AFF3P51826 1226 aaKnown RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 SATB1Q01826 763 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 CUL4AQ13619 759 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 TSTQ16762 297 aaKnown RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 RABL6Q3YEC7 729 aaPredicted RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ZACNQ401N2 412 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ANO6Q4KMQ2 910 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 C10orf76Q5T2E6 689 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 RAB12Q6IQ22 244 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 POMZP3Q6PJE2 187 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ZNF783Q6ZMS7 281 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 USP45Q70EL2 814 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 B4GALNT4Q76KP1 1039 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 MOGAT3Q86VF5 341 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 WDR63Q8IWG1 891 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ELOA2Q8IYF1 753 aaPredicted RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 PRR18Q8N4B5 295 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 MOSPD2Q8NHP6 518 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 SMCR8Q8TEV9 937 aaPredicted RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ACDQ96AP0 544 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 ZUFSPQ96AP4 578 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 DCAF5Q96JK2 942 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 PHACTR3Q96KR7 559 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 SPATA17Q96L03 361 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 FGD4Q96M96 766 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 MXD3Q9BW11 206 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 NOL6Q9H6R4 1146 aaKnown RBP6.27□□□□□ -1.41
ERCC4-202ENST00000389138 CYP8B1Q9UNU6 501 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 COQ6Q9Y2Z9 468 aa6.27□□□□□ -1.41
ERCC4-202ENST00000389138 F8W8V4 182 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 IRAK2O43187 625 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 SLC22A3O75751 556 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 TP53P04637 393 aaPredicted RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 RPS2P15880 293 aaKnown RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 HTR1BP28222 390 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 PBLDP30039 288 aaPredicted RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 KLHL30Q0D2K2 578 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 ADAM15Q13444 863 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 PCSK7Q16549 785 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CLEC16AQ2KHT3 1053 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 KLHDC7AQ5VTJ3 777 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 TDRD10Q5VZ19 366 aaKnown RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 KDELC1Q6UW63 502 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CCDC91Q7Z6B0 441 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 SYT9Q86SS6 491 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 RAB11FIP4Q86YS3 637 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 VPS52Q8N1B4 723 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 ADAMTS15Q8TE58 950 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CNDP1Q96KN2 507 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 FAM210AQ96ND0 272 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 DDX23Q9BUQ8 820 aaKnown RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CNPPD1Q9BV87 410 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 OR10A4Q9H209 315 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 ZNF576Q9H609 170 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 OBP2BQ9NPH6 170 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 DCP1AQ9NPI6 582 aaPredicted RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 GJB4Q9NTQ9 266 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 TMEM39AQ9NV64 488 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CGNQ9P2M7 1197 aaKnown RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 REV1Q9UBZ9 1251 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 PCDHA8Q9Y5H6 950 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 ATP23Q9Y6H3 246 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 NPC1O15118 1278 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 FSBPO95073 299 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 KIF20AO95235 890 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CELA2BP08218 269 aaPredicted RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 HSPA8P11142 646 aaKnown RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 MYF5P13349 255 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CCR5P51681 352 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 KPNA1P52294 538 aaPredicted RBP6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CYP4A11Q02928 519 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CREMQ03060 361 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 MAP3K12Q12852 859 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 TNIP1Q15025 636 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 TTC39AQ5SRH9 613 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 CDCP2Q5VXM1 449 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 ADAMTSL4Q6UY14 1074 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 TMEM151BQ8IW70 566 aa6.26□□□□□ -1.41
ERCC4-202ENST00000389138 TRIML1Q8N9V2 468 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms