RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ELMO3Q96BJ8 720 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 VCPIP1Q96JH7 1222 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 E7EVH7 732 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 SHBGP04278 402 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 RFC5P40937 340 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 PIK3CAP42336 1068 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 NSFP46459 744 aaKnown RBP15.96■□□□□ 0.15
SCFD2-201ENST00000388940 CDR1P51861 262 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 WNT7BP56706 349 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 SYDE1Q6ZW31 735 aaPredicted RBP15.96■□□□□ 0.15
SCFD2-201ENST00000388940 MON1BQ7L1V2 547 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 TADA2BQ86TJ2 420 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 TMEM143Q96AN5 459 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 HAPLN2Q9GZV7 340 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 WHRNQ9P202 907 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 A0A0B4J269 797 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 ANKRD65E5RJM6 399 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 CLDN3O15551 220 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 CAND2O75155 1236 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 RRM1P23921 792 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 MAN1A1P33908 653 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 ACOT2P49753 483 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 CUL2Q13617 745 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 SLC29A2Q14542 456 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 C6orf118Q5T5N4 469 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 PRAMEF18Q5VWM3 479 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 CGRRF1Q99675 332 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 LRRC4CQ9HCJ2 640 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.96■□□□□ 0.15
SCFD2-201ENST00000388940 ADGRA2Q96PE1 1338 aa15.96■□□□□ 0.15
SCFD2-201ENST00000388940 DCDC2CA8MYV0 355 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 TBXAS1P24557 533 aaPredicted RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 ADCY2Q08462 1091 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 TARBP2Q15633 366 aaKnown RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 ZNF568Q3ZCX4 644 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 SGO2Q562F6 1265 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 LMBRD2Q68DH5 695 aaPredicted RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 ABRAQ8N0Z2 381 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 ZNF526Q8TF50 670 aaPredicted RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 CPA5Q8WXQ8 436 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 SLC7A3Q8WY07 619 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 SEMA4AQ9H3S1 761 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 PPANQ9NQ55 473 aaKnown RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 RBAKQ9NYW8 714 aaPredicted RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 PTPRJQ12913 1337 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 MEFVO15553 781 aaPredicted RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 PROSCO94903 275 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 CALCAP01258 141 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 TMOD1P28289 359 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 KCNJ1P48048 391 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 LIN9Q5TKA1 542 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 PHF13Q86YI8 300 aaPredicted RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 CYFIP2Q96F07 1278 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 APOBEC3GQ9HC16 384 aaKnown RBP15.95■□□□□ 0.14
SCFD2-201ENST00000388940 FZD1Q9UP38 647 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 ZNF541Q9H0D2 1346 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 CNTNAP2Q9UHC6 1331 aa15.95■□□□□ 0.14
SCFD2-201ENST00000388940 GOLGB1Q14789 3259 aaKnown RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 C5orf60A6NFR6 353 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 LRRIQ4A6NIV6 560 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 RIPK2O43353 540 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 SORBS3O60504 671 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 POTEJP0CG39 1038 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 ITIH2P19823 946 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 CALCOCO2Q13137 446 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 SMYD5Q6GMV2 418 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 TRMT10CQ7L0Y3 403 aaKnown RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 ARMC9Q7Z3E5 817 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 ZBTB45Q96K62 511 aaPredicted RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 FAM84AQ96KN4 292 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 MSTO1Q9BUK6 570 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 MRPL47Q9HD33 250 aaKnown RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 HOMER3Q9NSC5 361 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 NRBP2Q9NSY0 501 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 FBXO40Q9UH90 709 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 PTPN22Q9Y2R2 807 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 PPME1Q9Y570 386 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 SSC5DA1L4H1 1573 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 A0A0G2JMZ2 1700 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 PTPRFP10586 1907 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 GSTTP1A0A1W2PQM5 241 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 PSTPIP1O43586 416 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 ZBTB7AO95365 584 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 AGTP01019 485 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 CLTAP09496 248 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 ALDH5A1P51649 535 aaPredicted RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 AP3M2P53677 418 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 NOMO3P69849 1222 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 PTK6Q13882 451 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 PPP1R7Q15435 360 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 TNFAIP8L3Q5GJ75 292 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 SPOPLQ6IQ16 392 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 C6orf89Q6UWU4 347 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 GRK7Q8WTQ7 553 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 RAPGEF5Q92565 580 aa15.94■□□□□ 0.14
SCFD2-201ENST00000388940 TARS2Q9BW92 718 aaKnown RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 ROPN1BQ9BZX4 212 aaPredicted RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 ROPN1Q9HAT0 212 aaPredicted RBP15.94■□□□□ 0.14
SCFD2-201ENST00000388940 PCDHB4Q9Y5E5 795 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms