RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 OSBP2Q969R2 916 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 C11orf70Q9BRQ4 267 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 DCDC2Q9UHG0 476 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 IMPDH2P12268 514 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 DNAJC3Q13217 504 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 CENPPQ6IPU0 288 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 NLRP10Q86W26 655 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 GUF1Q8N442 669 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 ALDH8A1Q9H2A2 487 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 PCMTD2Q9NV79 361 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 MAGI2Q86UL8 1455 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF263O14978 683 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 CCND2P30279 289 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 CIITAP33076 1130 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 KCNQ4P56696 695 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 NANOGNBQ7Z5D8 188 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 TMEM161AQ9NX61 479 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 PHTF1Q9UMS5 762 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 BCAR1P56945 870 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 METTL16Q86W50 562 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 P3H2Q8IVL5 708 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 KRT87PA6NCN2 255 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 PDZK1P1A8MUH7 402 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 NUDT2P50583 147 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 COA7Q96BR5 231 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 ABHD8Q96I13 439 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 ZHX2Q9Y6X8 837 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 CFAP99D6REC4 459 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 PCCAP05165 728 aaPredicted RBP13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 RPS8P62241 208 aaKnown RBP13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 MXD4Q14582 209 aaPredicted RBP13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM71Q2Q1W2 868 aaKnown RBP13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 DPF2Q92785 391 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 ABCA8O94911 1581 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 CPA2P48052 419 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 EIF3EP60228 445 aaKnown RBP13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 CDHR1Q96JP9 859 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.32
SRGAP3-202ENST00000383836 DDX5P17844 614 aaKnown RBP13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 MIEF2Q96C03 454 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 ZC3H7BQ9UGR2 993 aaKnown RBP13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 APPL1Q9UKG1 709 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 GHRP10912 638 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 NAB2Q15742 525 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 ZNF699Q32M78 642 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 JAMLQ86YT9 394 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 FANCEQ9HB96 536 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 PCDHGB4Q9UN71 923 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 SAC3D1A6NKF1 404 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 K7ERI5 159 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 AP3B1O00203 1094 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 AP1G2O75843 785 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 BCL10O95999 233 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 SGSM1Q2NKQ1 1148 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 TRMT5Q32P41 509 aaKnown RBP13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 KLHL31Q9H511 634 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 FKBP6O75344 327 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 SRGNP10124 158 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.33
SRGAP3-202ENST00000383836 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 PECAM1P16284 738 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 CHRNDQ07001 517 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 INTS2Q9H0H0 1204 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 KCNN4O15554 427 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 IL12RB1P42701 662 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 RMDN1Q96DB5 314 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 A8MXQ7 604 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 TAF4O00268 1085 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 TNFAIP8O95379 198 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 APRTP07741 180 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 CHI3L2Q15782 390 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 OR8H2Q8N162 312 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 AGPAT1Q99943 283 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 ADD3Q9UEY8 706 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 F5H423 210 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 PTK2BQ14289 1009 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 ZNF667Q5HYK9 610 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 CYFIP1Q7L576 1253 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 E2F7Q96AV8 911 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 TMBIM4Q9HC24 238 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 ATP7BP35670 1465 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 A0A1W2PQJ5 194 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 RCAN1P53805 252 aa13.01□□□□□ -0.33
SRGAP3-202ENST00000383836 UBXN2AP68543 259 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms