RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 FNDC3AQ9Y2H6 1198 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 POMT1Q9Y6A1 747 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 TMEM94Q12767 1356 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 AFF2P51816 1311 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 A0A0U1RQJ8 604 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 F8VZ95 297 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ECEL1O95672 775 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 FGGP02679 453 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 C6orf222P0C671 652 aaPredicted RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 USP17L7P0C7H9 530 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 KRT15P19012 456 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 SPARCL1Q14515 664 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 LRRC24Q50LG9 513 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 SLC27A3Q5K4L6 730 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ZFAND2BQ8WV99 257 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 PRCCQ92733 491 aaPredicted RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 THAP11Q96EK4 314 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ANKRD2Q9GZV1 360 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 DDX47Q9H0S4 455 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 PABPC3Q9H361 631 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 PALMDQ9NP74 551 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 TBC1D23Q9NUY8 699 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ZFP69BQ9UJL9 534 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 REXO2Q9Y3B8 237 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 H7C1W4 665 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 HGSO14964 777 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 PRDM1O75626 825 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 TMCC1O94876 653 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 UBOX5O94941 541 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 STAMBPO95630 424 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 ATP6V1C1P21283 382 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 MARK3P27448 753 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 RFX5P48382 616 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 ALDH5A1P51649 535 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 RALGDSQ12967 914 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 NXNQ6DKJ4 435 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 ERICH5Q6P6B1 374 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 GUF1Q8N442 669 aaKnown RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAM133AQ8N9E0 248 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 RBBP8NLQ8NC74 664 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 OXER1Q8TDS5 423 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 ZNF566Q969W8 418 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 LRRC46Q96FV0 321 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 CDHR1Q96JP9 859 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAM81BQ96LP2 452 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 MLPHQ9BV36 600 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 CCSER1Q9C0I3 900 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 COX16Q9P0S2 106 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 SIRPGQ9P1W8 387 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 SUCLA2Q9P2R7 463 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAF1Q9UNN5 650 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 RTCBQ9Y3I0 505 aaKnown RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 TMEM110-MUSTN1A8MSY1 372 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 I3L4J1 428 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 MUSKO15146 869 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 DDX3YO15523 660 aaKnown RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 ATF2P15336 505 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 NOS2P35228 1153 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 TOB1P50616 345 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 APLP1P51693 650 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 CRTC2Q53ET0 693 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 CFAP157Q5JU67 520 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAM83BQ5T0W9 1011 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAM180BQ6P0A1 224 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 LONP2Q86WA8 852 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 TPH2Q8IWU9 490 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 GOLM1Q8NBJ4 401 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 CFAP61Q8NHU2 1237 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 ATP6V0A1Q93050 837 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 NLRP3Q96P20 1036 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 C10orf88Q9H8K7 445 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 DMAP1Q9NPF5 467 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 ARHGAP10A1A4S6 786 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 H0YCG3 227 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAM153BP0C7A2 387 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 PRG2P13727 222 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 EPB42P16452 691 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 CALB2P22676 271 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 ZNF268Q14587 947 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAM153CQ494X1 144 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 MINDY4Q4G0A6 757 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 DCAF17Q5H9S7 520 aaPredicted RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 KIAA1755Q5JYT7 1200 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 KLHDC7AQ5VTJ3 777 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 ALKBH5Q6P6C2 394 aaKnown RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 PLD3Q8IV08 490 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 LARP4BQ92615 738 aaKnown RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 INPP5DQ92835 1189 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 TTC17Q96AE7 1141 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 ZNF653Q96CK0 615 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 SP110Q9HB58 689 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 FAM153AQ9UHL3 310 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 TRMT112Q9UI30 125 aaKnown RBP6.03□□□□□ -1.44
RFC1-202ENST00000381897 PPT2Q9UMR5 302 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 XDHP47989 1333 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 MON2Q7Z3U7 1717 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 POTEFA5A3E0 1075 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 NBPF26B4DH59 902 aa6.03□□□□□ -1.44
RFC1-202ENST00000381897 PPIP5K2O43314 1243 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms