RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 EPM2AIP1Q7L775 607 aaPredicted RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 JAMLQ86YT9 394 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 RHOT1Q8IXI2 618 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 ARL8AQ96BM9 186 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 CARD9Q9H257 536 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 GJB6O95452 261 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 CYP2B6P20813 491 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 ATP5DP30049 168 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 STX2P32856 288 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 HOXD13P35453 343 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 RGS7P49802 495 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 OAZ1P54368 228 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 SNRPFP62306 86 aaKnown RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 TEX2Q8IWB9 1127 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 SAMD3Q8N6K7 520 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 C1orf131Q8NDD1 294 aaKnown RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 DNERQ8NFT8 737 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 OR6J1Q8NGC5 347 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 AFG1LQ8WV93 481 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 KRT35Q92764 455 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 RUNDC3BQ96NL0 473 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 RNF19AQ9NV58 838 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 AJAP1Q9UKB5 411 aaPredicted RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 PCDHGC5Q9Y5F6 944 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 MYH1P12882 1939 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 A6NNZ2 444 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 TOM1L1O75674 476 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 PRKCIP41743 596 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 PMS2P54278 862 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 KRT17Q04695 432 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 IFT88Q13099 833 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 TUBB8Q3ZCM7 444 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 TWF2Q6IBS0 349 aaKnown RBP13.3□□□□□ -0.28
CDX2-201ENST00000381020 ACAD10Q6JQN1 1059 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 SNX9Q9Y5X1 595 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 LRP5O75197 1615 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 HBP1O60381 514 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 LAMTOR4Q0VGL1 99 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 TRADDQ15628 312 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 SMTNL2Q2TAL5 461 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 SYCP2LQ5T4T6 812 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 FAM102AQ5T9C2 384 aaPredicted RBP13.3□□□□□ -0.28
CDX2-201ENST00000381020 NT5DC3Q86UY8 548 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 SPIRE2Q8WWL2 714 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 CHD4Q14839 1912 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 PHF20L1A8MW92 1017 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 CALB1P05937 261 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 ZNF286BP0CG31 522 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 SGSM1Q2NKQ1 1148 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 GLRA4Q5JXX5 417 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 EPS8L1Q8TE68 723 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 CDCA5Q96FF9 252 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 VIPAS39Q9H9C1 493 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 HOMER3Q9NSC5 361 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 PARVAQ9NVD7 372 aa13.3□□□□□ -0.28
CDX2-201ENST00000381020 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.3□□□□□ -0.28
CDX2-201ENST00000381020 ZNF214Q9UL59 606 aaPredicted RBP13.3□□□□□ -0.28
CDX2-201ENST00000381020 A0A087WZ62 844 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 OGTO15294 1046 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 MAPTP10636 758 aaKnown RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 GLRA2P23416 452 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 SNX16P57768 344 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 BBS9Q3SYG4 887 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 SEMA4DQ92854 862 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ZBTB10Q96DT7 871 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ZSWIM1Q9BR11 485 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 HEY1Q9Y5J3 304 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 DDX60Q8IY21 1712 aaKnown RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 PRPSAP2O60256 369 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 GH1P01241 217 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ITGB3P05106 788 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 KRT3P12035 628 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 MNAT1P51948 309 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ZBTB16Q05516 673 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 KIZQ2M2Z5 673 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 CCDC91Q7Z6B0 441 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 CPB2Q96IY4 423 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ACAP3Q96P50 834 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 RPS6KC1Q96S38 1066 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 ERP44Q9BS26 406 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 RASSF4Q9H2L5 321 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 HMGB1P1B2RPK0 211 aaPredicted RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 INSRRP14616 1297 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 FECHP22830 423 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 CYP2C19P33261 490 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 SLMAPQ14BN4 828 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 TXNDC16Q9P2K2 825 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 MAD1L1Q9Y6D9 718 aa13.29□□□□□ -0.28
CDX2-201ENST00000381020 KIAA0391O15091 583 aaKnown RBP13.29□□□□□ -0.28
CDX2-201ENST00000381020 TJP3O95049 919 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms