RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 DDX23Q9BUQ8 820 aaKnown RBP25.31■■□□□ 1.64
U2AF1-202ENST00000380276 WDR27A2RRH5 827 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 H7C4K7 107 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 ECI2O75521 394 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 PTGDRQ13258 359 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 ZBTB41Q5SVQ8 909 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 MAML2Q8IZL2 1156 aaPredicted RBP25.3■■□□□ 1.64
U2AF1-202ENST00000380276 C4orf32Q8N8J7 132 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 DRC1Q96MC2 740 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 PLA2G2FQ9BZM2 168 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 TMEM134Q9H6X4 195 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 GDE1Q9NZC3 331 aa25.3■■□□□ 1.64
U2AF1-202ENST00000380276 NOTCH4Q99466 2003 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 PP2D1A8MPX8 630 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 MCM4P33991 863 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 GRM2Q14416 872 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 CTXN3Q4LDR2 81 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 TANGO2Q6ICL3 276 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 SLC8B1Q6J4K2 584 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 PDZD4Q76G19 769 aaPredicted RBP25.29■■□□□ 1.64
U2AF1-202ENST00000380276 C18orf25Q96B23 403 aaPredicted RBP25.29■■□□□ 1.64
U2AF1-202ENST00000380276 ZMAT2Q96NC0 199 aaKnown RBP25.29■■□□□ 1.64
U2AF1-202ENST00000380276 RUSC1Q9BVN2 902 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 HEBP1Q9NRV9 189 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 PPP4R2Q9NY27 417 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 ANKFY1Q9P2R3 1169 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 NCDNQ9UBB6 729 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 SPTBN4Q9H254 2564 aa25.29■■□□□ 1.64
U2AF1-202ENST00000380276 SLC16A4O15374 487 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 NCAM2O15394 837 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 SEC24BO95487 1268 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 MCF2P10911 925 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 TARSP26639 723 aaKnown RBP25.28■■□□□ 1.64
U2AF1-202ENST00000380276 STRN3Q13033 797 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 PDIA5Q14554 519 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 MPZL3Q6UWV2 235 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 DGLUCYQ7Z3D6 616 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 DAW1Q8N136 415 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 ELMOD1Q8N336 334 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 OSBPL6Q9BZF3 934 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 FBXO4Q9UKT5 387 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 PCDHB6Q9Y5E3 794 aa25.28■■□□□ 1.64
U2AF1-202ENST00000380276 ARHGEF37A1IGU5 675 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 SFI1A8K8P3 1242 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 SYN3O14994 580 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 CDC25AP30304 524 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 MATR3P43243 847 aaKnown RBP eCLIP25.27■■□□□ 1.64
U2AF1-202ENST00000380276 MAGEA9P43362 315 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 SEZ6Q53EL9 994 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 XKR4Q5GH76 650 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 ALKAL1Q6UXT8 129 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 ZNF852Q6ZMS4 543 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 TAS1R3Q7RTX0 852 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 IGSF22Q8N9C0 903 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 ATRIPQ8WXE1 791 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 TCEAL4Q96EI5 215 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 ZSCAN31Q96LW9 406 aaPredicted RBP25.27■■□□□ 1.64
U2AF1-202ENST00000380276 PTPRHQ9HD43 1115 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 ARHGAP28Q9P2N2 729 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 FBXL5Q9UKA1 691 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 MRPS17Q9Y2R5 130 aaKnown RBP25.27■■□□□ 1.64
U2AF1-202ENST00000380276 RBM19Q9Y4C8 960 aaKnown RBP25.27■■□□□ 1.64
U2AF1-202ENST00000380276 INSL5Q9Y5Q6 135 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 PATJQ8NI35 1801 aa25.27■■□□□ 1.64
U2AF1-202ENST00000380276 ZNF197O14709 1029 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 ABLIM3O94929 683 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 SEC24AO95486 1093 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 ATF2P15336 505 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 KCNE1P15382 129 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 RAD51AP2Q09MP3 1159 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 ZNF528Q3MIS6 628 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 CYP4A22Q5TCH4 519 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 IQCEQ6IPM2 695 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 ZNF280DQ6N043 979 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 RINT1Q6NUQ1 792 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 ELSPBP1Q96BH3 223 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 ZBTB45Q96K62 511 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-202ENST00000380276 NELL2Q99435 816 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 BRD9Q9H8M2 597 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 ZFP14Q9HCL3 533 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 CNTN3Q9P232 1028 aa25.26■■□□□ 1.63
U2AF1-202ENST00000380276 NDRG2Q9UN36 371 aaKnown RBP25.26■■□□□ 1.63
U2AF1-202ENST00000380276 FANCMQ8IYD8 2048 aa25.25■■□□□ 1.63
U2AF1-202ENST00000380276 CPB1P15086 417 aa25.25■■□□□ 1.63
U2AF1-202ENST00000380276 RPL9P32969 192 aaKnown RBP25.25■■□□□ 1.63
U2AF1-202ENST00000380276 ADCY1Q08828 1119 aa25.25■■□□□ 1.63
U2AF1-202ENST00000380276 TSSK4Q6SA08 328 aa25.25■■□□□ 1.63
U2AF1-202ENST00000380276 DTHD1Q6ZMT9 781 aa25.25■■□□□ 1.63
U2AF1-202ENST00000380276 AVENQ9NQS1 362 aaPredicted RBP25.25■■□□□ 1.63
U2AF1-202ENST00000380276 SPTLC1O15269 473 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 MYL4P12829 197 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 MARCKSP29966 332 aaPredicted RBP25.24■■□□□ 1.63
U2AF1-202ENST00000380276 TWF1Q12792 350 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 MAPK7Q13164 816 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 NOLC1Q14978 699 aaKnown RBP eCLIP25.24■■□□□ 1.63
U2AF1-202ENST00000380276 PRSS36Q5K4E3 855 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 KCNK18Q7Z418 384 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 TCEAL8Q8IYN2 117 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 SUMF1Q8NBK3 374 aa25.24■■□□□ 1.63
U2AF1-202ENST00000380276 APPL2Q8NEU8 664 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms