RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 ACSF2Q96CM8 615 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MAGEB18Q96M61 343 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 AGAP3Q96P47 875 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RANBP17Q9H2T7 1088 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MYL2P10916 166 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PSMC1P62191 440 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PRAMEP78395 509 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ITGB3BPQ13352 177 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TTMPQ5BVD1 217 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 C12orf60Q5U649 245 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 HAUS6Q7Z4H7 955 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RAB44Q7Z6P3 723 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 IVNS1ABPQ9Y6Y0 642 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 A0A087X0B3 334 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RSPH10B2B2RC85 870 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ATP9BO43861 1147 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RSPH10BP0C881 870 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 PYGBP11216 843 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RFX5P48382 616 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 FAM102AQ5T9C2 384 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 LMBRD2Q68DH5 695 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 TEKT4Q8WW24 435 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 HIC2Q96JB3 615 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MTA3Q9BTC8 594 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 TMEM121Q9BTD3 319 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 KIAA1586Q9HCI6 787 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CD209Q9NNX6 404 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 DDX18Q9NVP1 670 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ZFATQ9P243 1243 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CTNNAL1Q9UBT7 734 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 OVOS2A0A0G2JMS6 1433 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RPS6KA5O75582 802 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SRGAP2BP0DMP2 458 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 VCPP55072 806 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 GEMIN4P57678 1058 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RASA2Q15283 850 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MEI1Q5TIA1 1274 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SLFN12LQ6IEE8 588 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SWSAP1Q6NVH7 229 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RWDD4Q6NW29 188 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SYDE1Q6ZW31 735 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ARID3BQ8IVW6 561 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ZNF668Q96K58 619 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 DHX36Q9H2U1 1008 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SRP68Q9UHB9 627 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MAGEA13PA6NCF6 341 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ZNF844Q08AG5 666 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 DNAL1Q4LDG9 190 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MROH9Q5TGP6 573 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 PI4K2AQ9BTU6 479 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SEMA6BQ9H3T3 888 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 NRBP2Q9NSY0 501 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 AIM2O14862 343 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ZBTB39O15060 712 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 TRAPPC3O43617 180 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 P4HBP07237 508 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 IFI35P80217 286 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 PTK7Q13308 1070 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CAPRIN1Q14444 709 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SNRNP35Q16560 246 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ZBTB41Q5SVQ8 909 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ALKBH8Q96BT7 664 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MTBPQ96DY7 904 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 NSL1Q96IY1 281 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 AGXT2Q9BYV1 514 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CARD9Q9H257 536 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ASNSD1Q9NWL6 643 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CHMP2BQ9UQN3 213 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MYO18AQ92614 2054 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 FLT1P17948 1338 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CYP19A1P11511 503 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 COILP38432 576 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 PIGHQ14442 188 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 TRIP10Q15642 601 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 GADL1Q6ZQY3 521 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 TMEM179Q6ZVK1 233 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SCG3Q8WXD2 468 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ZNF512BQ96KM6 892 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MRPL1Q9BYD6 325 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CLEC11AQ9Y240 323 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ENOSF1Q7L5Y1 443 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 KIAA0895Q8NCT3 520 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 PCMTD2Q9NV79 361 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 INTS13Q9NVM9 706 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 NAALADL1Q9UQQ1 740 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 COL3A1P02461 1466 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 TULP2O00295 520 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 RIPK2O43353 540 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 ADCY3O60266 1144 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 MYBL2P10244 700 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 PMLP29590 882 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 SERPINB5P36952 375 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 KCNT1Q5JUK3 1230 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 WDR59Q6PJI9 974 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 KIAA2013Q8IYS2 634 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 CLEC4FQ8N1N0 589 aa4.41□□□□□ -1.7
BRCA2-201ENST00000380152 AENQ8WTP8 325 aaKnown RBP4.41□□□□□ -1.7
BRCA2-201ENST00000380152 TSC22D4Q9Y3Q8 395 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms