RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TMEM150BA6NC51 233 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 BTNL10A8MVZ5 291 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 PSMA2P25787 234 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 STAT4Q14765 748 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 DAB2IPQ5VWQ8 1189 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 LDHDQ86WU2 507 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 KCNMB3Q9NPA1 279 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 PHTF1Q9UMS5 762 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 USH1CQ9Y6N9 552 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 DDX3YO15523 660 aaKnown RBP12.06□□□□□ -0.48
SMAD9-202ENST00000379826 NOP14P78316 857 aaKnown RBP12.06□□□□□ -0.48
SMAD9-202ENST00000379826 LRRC57Q8N9N7 239 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 KIF9Q9HAQ2 790 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 SCOCQ9UIL1 159 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
SMAD9-202ENST00000379826 HAUS5O94927 633 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 SLITRK3O94933 977 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 SERPINB6P35237 376 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 CHKAP35790 457 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 SREBF1P36956 1147 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 SWT1Q5T5J6 900 aaKnown RBP12.06□□□□□ -0.48
SMAD9-202ENST00000379826 ELMSAN1Q6PJG2 1045 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 HIPK4Q8NE63 616 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 TSNARE1Q96NA8 513 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 MKNK1Q9BUB5 465 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 TRIM55Q9BYV6 548 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 OSBPL7Q9BZF2 842 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 ATP6V0A4Q9HBG4 840 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 UVRAGQ9P2Y5 699 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 MCM8Q9UJA3 840 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 LRFN2Q9ULH4 789 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 RHBDL3P58872 404 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 CDO1Q16878 200 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 PCSK1NQ9UHG2 260 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 MAGED2Q9UNF1 606 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 ATXN2Q99700 1313 aaKnown RBP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 TOM1L1O75674 476 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 ACOT2P49753 483 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 SOX10P56693 466 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 TFAMQ00059 246 aaKnown RBP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 LGSNQ5TDP6 509 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 RASIP1Q5U651 963 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 PHLDB3Q6NSJ2 640 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 LVRNQ6Q4G3 990 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 RHPN2Q8IUC4 686 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 SEPT10Q9P0V9 454 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 COG5Q9UP83 839 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 KIAA0391O15091 583 aaKnown RBP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 DKC1O60832 514 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 CDH16O75309 829 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 CYP11B1P15538 503 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 GPD1LQ8N335 351 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 AGAP11Q8TF27 550 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 MAGEB18Q96M61 343 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 SCINQ9Y6U3 715 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 NDC80O14777 642 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 ATP5HO75947 161 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 PRKCIP41743 596 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 CNGA2Q16280 664 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 DUPD1Q68J44 220 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 NAIF1Q69YI7 327 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 SP8Q8IXZ3 490 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 ALG3Q92685 438 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 PPP1R16BQ96T49 567 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 GABBR1Q9UBS5 961 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 LRP6O75581 1613 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 PHRF1Q9P1Y6 1649 aaKnown RBP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 SLC26A4O43511 780 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 SPATA31C1P0DKV0 1188 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 IL1R1P14778 569 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 NOP9Q86U38 636 aaKnown RBP12.05□□□□□ -0.48
SMAD9-202ENST00000379826 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 DNAJC18Q9H819 358 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 CHST7Q9NS84 486 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 DONSONQ9NYP3 566 aa12.05□□□□□ -0.48
SMAD9-202ENST00000379826 MCF2LO15068 1137 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 KRT10P13645 584 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 FNTAP49354 379 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 ARFIP2P53365 341 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 DGKZQ13574 1117 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 AUHQ13825 339 aaKnown RBP12.04□□□□□ -0.48
SMAD9-202ENST00000379826 SWSAP1Q6NVH7 229 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 PALB2Q86YC2 1186 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 KBTBD13C9JR72 458 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 TMEM191BP0C7N4 346 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 ARL4CP56559 192 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 ACAD10Q6JQN1 1059 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 ZNF668Q96K58 619 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-202ENST00000379826 AGBL1Q96MI9 1066 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 FAM161BQ96MY7 647 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 MCEEQ96PE7 176 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 PPARGC1AQ9UBK2 798 aaKnown RBP12.04□□□□□ -0.48
SMAD9-202ENST00000379826 NAALADL1Q9UQQ1 740 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 UBE4BO95155 1302 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 TCRBV7S2A1N4TA0A589 114 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 GSTA1P08263 222 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms