RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 NT5C1BQ96P26 610 aa12.93□□□□□ -0.34
EXOSC9-202ENST00000379663 TSPAN18Q96SJ8 248 aa12.93□□□□□ -0.34
EXOSC9-202ENST00000379663 FAM105AQ9NUU6 356 aa12.93□□□□□ -0.34
EXOSC9-202ENST00000379663 ARHGAP20Q9P2F6 1191 aa12.93□□□□□ -0.34
EXOSC9-202ENST00000379663 MYH10P35580 1976 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 PTPRSQ13332 1948 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 MGEA5O60502 916 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 ZNF623O75123 536 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 TNNC2P02585 160 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 TFRCP02786 760 aaKnown RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SELPP16109 830 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 RAB27AP51159 221 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 YARSP54577 528 aaKnown RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 TFAMQ00059 246 aaKnown RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 BFSP2Q13515 415 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 RAPGEF1Q13905 1077 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 MTF1Q14872 753 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 DRAP1Q14919 205 aaPredicted RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 TMEM132DQ14C87 1099 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 ZBTB6Q15916 424 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SFMBT2Q5VUG0 894 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SCARA3Q6AZY7 606 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SMYD5Q6GMV2 418 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 IRF2BP2Q7Z5L9 587 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 DIS3LQ8TF46 1054 aaKnown RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SHC3Q92529 594 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 FAM81BQ96LP2 452 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 ZMAT2Q96NC0 199 aaKnown RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SPAG5Q96R06 1193 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 CXCL16Q9H2A7 254 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 ZNHIT6Q9NWK9 470 aaKnown RBP12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SIX4Q9UIU6 781 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
EXOSC9-202ENST00000379663 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 ZNF500O60304 480 aaPredicted RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 KCNE1P15382 129 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 MSNP26038 577 aaKnown RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 SOX5P35711 763 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 GPNMBQ14956 572 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 ASTE1Q2TB18 679 aaPredicted RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 ENOSF1Q7L5Y1 443 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 MRPL10Q7Z7H8 261 aaKnown RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 FMNL3Q8IVF7 1028 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 CCDC170Q8IYT3 715 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 PPM1KQ8N3J5 372 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 KAT5Q92993 513 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 PI4K2AQ9BTU6 479 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 VRTNQ9H8Y1 702 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 APOBEC3GQ9HC16 384 aaKnown RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 UBE2TQ9NPD8 197 aaPredicted RBP12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 C1orf112Q9NSG2 853 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
EXOSC9-202ENST00000379663 A0A0U1RQF3 1178 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 TLR3O15455 904 aaKnown RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 EVI5O60447 810 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 PQBP1O60828 265 aaKnown RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 LCA5LO95447 670 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 STAU1O95793 577 aaKnown RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 SERPING1P05155 500 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 PLEKP08567 350 aaPredicted RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 ZSCAN20P17040 1043 aaPredicted RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 AKAP5P24588 427 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 STAT1P42224 750 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 FAAP100Q0VG06 881 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 OLIG1Q8TAK6 271 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 TAF4BQ92750 862 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 TATDN2Q93075 761 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 JAKMIP2Q96AA8 810 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 IFIH1Q9BYX4 1025 aaKnown RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 NUB1Q9Y5A7 615 aa12.9□□□□□ -0.34
EXOSC9-202ENST00000379663 FOXN3O00409 490 aaPredicted RBP12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 PTGESO14684 152 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 NBNO60934 754 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 PHACTR2O75167 634 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 NDUFA10O95299 355 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 ITGB3P05106 788 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 PNMA6AP0CW24 399 aaPredicted RBP12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 FERP16591 822 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 MFAP3P55082 362 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 MYL6P60660 151 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 CUL2Q13617 745 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 ASIC2Q16515 512 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 ARHGAP44Q17R89 818 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 SGSM1Q2NKQ1 1148 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 TRIM60Q495X7 471 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 WDR44Q5JSH3 913 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 SPOPLQ6IQ16 392 aa12.89□□□□□ -0.35
EXOSC9-202ENST00000379663 FAM71AQ8IYT1 594 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms