RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ABHD14A-ACY1A0A1B0GW23 586 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 VNN1O95497 513 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 ITGB3P05106 788 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 KRT19P08727 400 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 FGFR1P11362 822 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 ACTN1P12814 892 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 TRIM21P19474 475 aaKnown RBP17.02■□□□□ 0.32
CCDC107-204ENST00000378409 SCNN1GP51170 649 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 APBA1Q02410 837 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 CCDC173Q0VFZ6 552 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 TRPC3Q13507 836 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 NCOA4Q13772 614 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 PRPF38BQ5VTL8 546 aaKnown RBP17.02■□□□□ 0.32
CCDC107-204ENST00000378409 TRIM65Q6PJ69 517 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 GLB1LQ6UWU2 654 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC107-204ENST00000378409 C1orf127Q8N9H9 656 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 HELQQ8TDG4 1101 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 PDLIM2Q96JY6 352 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
CCDC107-204ENST00000378409 RAB20Q9NX57 234 aa17.02■□□□□ 0.32
CCDC107-204ENST00000378409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC107-204ENST00000378409 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.31
CCDC107-204ENST00000378409 GOLGA6L6A8MZA4 724 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 EFCAB14O75071 495 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 LRRN2O75325 713 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 OFD1O75665 1012 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 POMCP01189 267 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 THP07101 528 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 AFF1P51825 1210 aaKnown RBP17.01■□□□□ 0.31
CCDC107-204ENST00000378409 LRMPQ12912 555 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 ZBTB6Q15916 424 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 CLLU1OSQ5K130 101 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 SCARA3Q6AZY7 606 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 PPFIBP1Q86W92 1011 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 NPAS4Q8IUM7 802 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 GSTCDQ8NEC7 633 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 LMO3Q8TAP4 145 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 URGCPQ8TCY9 931 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 CPLX3Q8WVH0 158 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 PPP1R10Q96QC0 940 aaKnown RBP17.01■□□□□ 0.31
CCDC107-204ENST00000378409 PI4K2AQ9BTU6 479 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 NUP58Q9BVL2 599 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 IMPG2Q9BZV3 1241 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 PLCB1Q9NQ66 1216 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 SLC38A7Q9NVC3 462 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 MIOSQ9NXC5 875 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 SIX4Q9UIU6 781 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 ITGA11Q9UKX5 1188 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 PLAGL2Q9UPG8 496 aa17.01■□□□□ 0.31
CCDC107-204ENST00000378409 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
CCDC107-204ENST00000378409 EPHB6O15197 1021 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 UPP2O95045 317 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 CST3P01034 146 aaPredicted RBP17■□□□□ 0.31
CCDC107-204ENST00000378409 TPM1P09493 284 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 POLR2BP30876 1174 aaKnown RBP17■□□□□ 0.31
CCDC107-204ENST00000378409 MYL6P60660 151 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 SOX4Q06945 474 aaPredicted RBP17■□□□□ 0.31
CCDC107-204ENST00000378409 TRIM14Q14142 442 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 WDR44Q5JSH3 913 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 KLHDC7AQ5VTJ3 777 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 ABI1Q8IZP0 508 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 CCDC150Q8NCX0 1101 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 ELMO3Q96BJ8 720 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 LBHD1Q9BQE6 289 aaPredicted RBP17■□□□□ 0.31
CCDC107-204ENST00000378409 SIX2Q9NPC8 291 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 IMPACTQ9P2X3 320 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 AGAP1Q9UPQ3 857 aa17■□□□□ 0.31
CCDC107-204ENST00000378409 INPPL1O15357 1258 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 HOXA2O43364 376 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 BAIAP3O94812 1187 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 NOL4O94818 638 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 AMHP03971 560 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 GYPCP04921 128 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 CYP3A5P20815 502 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 GATMP50440 423 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 POLR2FP61218 127 aaKnown RBP16.99■□□□□ 0.31
CCDC107-204ENST00000378409 RBP5P82980 135 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 GRIK3Q13003 919 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 TBX2Q13207 712 aaPredicted RBP16.99■□□□□ 0.31
CCDC107-204ENST00000378409 ZNF699Q32M78 642 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 NOMO2Q5JPE7 1267 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 DPY19L2P1Q6NXN4 242 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 ZNF365Q70YC5 407 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 C16orf59Q7L2K0 433 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 OTOP2Q7RTS6 562 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 CXorf38Q8TB03 319 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 NT5C1BQ96P26 610 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 PPP1R9BQ96SB3 815 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 GANQ9H2C0 597 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 APEX2Q9UBZ4 518 aa16.99■□□□□ 0.31
CCDC107-204ENST00000378409 ZBBXA8MT70 800 aa16.98■□□□□ 0.31
CCDC107-204ENST00000378409 ZC3H11AO75152 810 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC107-204ENST00000378409 ASS1P00966 412 aaKnown RBP16.98■□□□□ 0.31
CCDC107-204ENST00000378409 FGBP02675 491 aa16.98■□□□□ 0.31
CCDC107-204ENST00000378409 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
CCDC107-204ENST00000378409 UCHL3P15374 230 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms