RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CYP11B1P15538 503 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 EIF3BP55884 814 aaKnown RBP15.39■□□□□ 0.05
TCOF1-202ENST00000377797 ZC3H15Q8WU90 426 aaKnown RBP15.39■□□□□ 0.05
TCOF1-202ENST00000377797 MTMR8Q96EF0 704 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 NT5C1AQ9BXI3 368 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 ABHD16BQ9H3Z7 469 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 KLHL11Q9NVR0 708 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 EHD2Q9NZN4 543 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 STAP1Q9ULZ2 295 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 BRD2P25440 801 aaKnown RBP15.39■□□□□ 0.05
TCOF1-202ENST00000377797 GYS2P54840 703 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 MAP4K3Q8IVH8 894 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 PARD3BQ8TEW8 1205 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 DHX38Q92620 1227 aaKnown RBP15.39■□□□□ 0.05
TCOF1-202ENST00000377797 CCDC97Q96F63 343 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-202ENST00000377797 CFAP57Q96MR6 1250 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 FAM49BQ9NUQ9 324 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 WDR35Q9P2L0 1181 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 NUP188Q5SRE5 1749 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 ADCY3O60266 1144 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 GLRA4Q5JXX5 417 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 DNAAF3Q8N9W5 541 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 MCEEQ96PE7 176 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 SMC6Q96SB8 1091 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 CGRRF1Q99675 332 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 ZCCHC17Q9NP64 241 aaKnown RBP15.39■□□□□ 0.05
TCOF1-202ENST00000377797 ZC3H11AO75152 810 aaKnown RBP eCLIP15.38■□□□□ 0.05
TCOF1-202ENST00000377797 SLC12A2P55011 1212 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 C2CD6Q53TS8 623 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 MIIPQ5JXC2 388 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 IRF2BP1Q8IU81 584 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 ANKRD63C9JTQ0 380 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 PDGFRAP16234 1089 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CDH6P55285 790 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
TCOF1-202ENST00000377797 SPOPLQ6IQ16 392 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CENPUQ71F23 418 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 VSIG1Q86XK7 387 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 APPL2Q8NEU8 664 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 ZBTB45Q96K62 511 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-202ENST00000377797 VTA1Q9NP79 307 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 NHSL1Q5SYE7 1610 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 EXOC1LA0A1B0GW35 172 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 TTI1O43156 1089 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CPP00450 1065 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CBWD6Q4V339 395 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CBWD3Q5JTY5 395 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CBWD5Q5RIA9 395 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CEP57Q86XR8 500 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 PYROXD1Q8WU10 500 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 SLC20A1Q8WUM9 679 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 COPS5Q92905 334 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 INPP4AQ96PE3 977 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-202ENST00000377797 SETD4Q9NVD3 440 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 SLC12A6Q9UHW9 1150 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CD4P01730 458 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 GGCXP38435 758 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 FCGRTP55899 365 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
TCOF1-202ENST00000377797 STILQ15468 1287 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 ACAD10Q6JQN1 1059 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 CDKL2Q92772 493 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 TATDN2Q93075 761 aa15.38■□□□□ 0.05
TCOF1-202ENST00000377797 DDX56Q9NY93 547 aaKnown RBP15.38■□□□□ 0.05
TCOF1-202ENST00000377797 ASTN1O14525 1302 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 VGLL3A8MV65 326 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 I3L4J1 428 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 LCP1P13796 627 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 NR1D1P20393 614 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 ADCYAP1R1P41586 468 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 BCAR1P56945 870 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 DHX34Q14147 1143 aaKnown RBP15.37■□□□□ 0.05
TCOF1-202ENST00000377797 MEA1Q16626 185 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 BZW1Q7L1Q6 419 aaKnown RBP15.37■□□□□ 0.05
TCOF1-202ENST00000377797 TBC1D31Q96DN5 1066 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 DHX35Q9H5Z1 703 aaKnown RBP15.37■□□□□ 0.05
TCOF1-202ENST00000377797 SAYSD1Q9NPB0 183 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 KLK14Q9P0G3 267 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 COL20A1Q9P218 1284 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 CRYBG1Q9Y4K1 1723 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 USP2O75604 605 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-202ENST00000377797 STAG3L1P0CL83 205 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 TMED2Q15363 201 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 CCDC6Q16204 474 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 SLC47A2Q86VL8 602 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 GPATCH11Q8N954 259 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 ELMO3Q96BJ8 720 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 KCNH4Q9UQ05 1017 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 EPHB6O15197 1021 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 CSPG5O95196 566 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 MYL6P60660 151 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 JAG1P78504 1218 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 UGCGQ16739 394 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 GKAP1Q5VSY0 366 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-202ENST00000377797 CACNA2D3Q8IZS8 1091 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 C1orf131Q8NDD1 294 aaKnown RBP15.37■□□□□ 0.05
TCOF1-202ENST00000377797 URGCPQ8TCY9 931 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
TCOF1-202ENST00000377797 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
TCOF1-202ENST00000377797 C17orf102A2RUQ5 167 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms