RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 PXMP2Q9NR77 195 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 WHRNQ9P202 907 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 MAPK13O15264 365 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 LYPLA2O95372 231 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 TTC4O95801 387 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 GAS8O95995 478 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 UNGP13051 313 aaPredicted RBP19.3■□□□□ 0.68
SF1-203ENST00000377387 ITIH2P19823 946 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 IVDP26440 423 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 MTMR2Q13614 643 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 MTERF2Q49AM1 385 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 PRAMEF18Q5VWM3 479 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 SCARA3Q6AZY7 606 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 ZNF365Q70YC5 407 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 ANKS1BQ7Z6G8 1248 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 SUPT20HQ8NEM7 779 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 ZBTB45Q96K62 511 aaPredicted RBP19.3■□□□□ 0.68
SF1-203ENST00000377387 MFSD14AQ96MC6 490 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 NSRP1Q9H0G5 558 aaKnown RBP19.3■□□□□ 0.68
SF1-203ENST00000377387 SLC38A10Q9HBR0 1119 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 PPP1R1BQ9UD71 204 aaPredicted RBP19.3■□□□□ 0.68
SF1-203ENST00000377387 PCDHA10Q9Y5I2 948 aa19.3■□□□□ 0.68
SF1-203ENST00000377387 DPEP1P16444 411 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 JAK3P52333 1124 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 ELF3P78545 371 aaPredicted RBP19.29■□□□□ 0.68
SF1-203ENST00000377387 TMEM270Q6UE05 265 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 NIPA1Q7RTP0 329 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 C12orf50Q8NA57 414 aaPredicted RBP19.29■□□□□ 0.68
SF1-203ENST00000377387 GMLQ99445 158 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 NINJ2Q9NZG7 142 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
SF1-203ENST00000377387 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 SNX3O60493 162 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 KRT10P13645 584 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 PIK3CAP42336 1068 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 XRCC4Q13426 336 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 WDR44Q5JSH3 913 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 ACSF2Q96CM8 615 aaPredicted RBP19.29■□□□□ 0.68
SF1-203ENST00000377387 DDX27Q96GQ7 796 aaKnown RBP19.29■□□□□ 0.68
SF1-203ENST00000377387 TMEM109Q9BVC6 243 aa19.29■□□□□ 0.68
SF1-203ENST00000377387 MOV10L1Q9BXT6 1211 aaKnown RBP19.29■□□□□ 0.68
SF1-203ENST00000377387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.29■□□□□ 0.68
SF1-203ENST00000377387 WNT10BO00744 389 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 HLA-DRAP01903 254 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 DSG3P32926 999 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 LIG4P49917 911 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 NLRP11P59045 1033 aaKnown RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 CROCCP2Q86T23 111 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 KIF2BQ8N4N8 673 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 TMEM143Q96AN5 459 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 HAUS1Q96CS2 278 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 ATG4CQ96DT6 458 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 ROPN1BQ9BZX4 212 aaPredicted RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 ROPN1Q9HAT0 212 aaPredicted RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 ANKEF1Q9NU02 776 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 LOC102724159A0A0B4J2E5 919 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 ZSCAN5DPP0CG00 497 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 KRT76Q01546 638 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 PWP2Q15269 919 aaKnown RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 RHBDF2Q6PJF5 856 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 ATL2Q8NHH9 583 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 TMC2Q8TDI7 906 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 RPAP3Q9H6T3 665 aaPredicted RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 ADAM22Q9P0K1 906 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 GHRP10912 638 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 IRX3P78415 501 aaPredicted RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 BRDTQ58F21 947 aaPredicted RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 TNFAIP8L3Q5GJ75 292 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 ZBTB41Q5SVQ8 909 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 IZUMO3Q5VZ72 239 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 MFSD5Q6N075 450 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 FAM47EQ6ZV65 393 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 TAS1R3Q7RTX0 852 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 TTLL6Q8N841 843 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 ANKFY1Q9P2R3 1169 aa19.28■□□□□ 0.68
SF1-203ENST00000377387 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.28■□□□□ 0.68
SF1-203ENST00000377387 PTPRJQ12913 1337 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 WDR46O15213 610 aaKnown RBP19.27■□□□□ 0.68
SF1-203ENST00000377387 PMM2O15305 246 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 DNAJC8O75937 253 aaPredicted RBP19.27■□□□□ 0.68
SF1-203ENST00000377387 NR3C2P08235 984 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 TCF4P15884 667 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 ATF7P17544 494 aaPredicted RBP19.27■□□□□ 0.68
SF1-203ENST00000377387 STX2P32856 288 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 KCNJ2P63252 427 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 ITIH4Q14624 930 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 DEFB132Q7Z7B7 95 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 USP37Q86T82 979 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 GLIS1Q8NBF1 620 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 SERPINB12Q96P63 405 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 NCAPGQ9BPX3 1015 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 POLR3FQ9H1D9 316 aaPredicted RBP19.27■□□□□ 0.68
SF1-203ENST00000377387 NAALADL1Q9UQQ1 740 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 PCDHB2Q9Y5E7 798 aa19.27■□□□□ 0.68
SF1-203ENST00000377387 SPAG7O75391 227 aa19.27■□□□□ 0.67
SF1-203ENST00000377387 PTK6Q13882 451 aa19.27■□□□□ 0.67
SF1-203ENST00000377387 TMED2Q15363 201 aa19.27■□□□□ 0.67
SF1-203ENST00000377387 TDRD10Q5VZ19 366 aaKnown RBP19.27■□□□□ 0.67
SF1-203ENST00000377387 DEFB129Q9H1M3 183 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms