RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 TMEM253P0C7T8 217 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 SLC8A1P32418 973 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 TAF6P49848 677 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 ACCSLQ4AC99 568 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 C15orf52Q6ZUT6 534 aaKnown RBP18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 EXT2Q93063 718 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 ARSEP51690 589 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 RUBCNQ92622 972 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 KIF1AQ12756 1690 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 NVLO15381 856 aaKnown RBP18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 TOB1P50616 345 aaPredicted RBP18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 OAZ1P54368 228 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 APOBEC3HQ6NTF7 200 aaKnown RBP18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 YAF2Q8IY57 180 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 ZBED8Q8IZ13 594 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 KLHL29Q96CT2 875 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 VPS11Q9H270 941 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 ABCF3Q9NUQ8 709 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 KBTBD4Q9NVX7 518 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 ADAM21Q9UKJ8 722 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 TARSL2A2RTX5 802 aaKnown RBP18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 DFFAO00273 331 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 SNX2O60749 519 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 C4orf19Q8IY42 314 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 CNPY4Q8N129 248 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 TC2NQ8N9U0 490 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 MYCBPQ99417 103 aaPredicted RBP18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 ESYT3A0FGR9 886 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 UPP2O95045 317 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 KRT17Q04695 432 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 CACNB2Q08289 660 aaPredicted RBP18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 MCEEQ96PE7 176 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 KIFC3Q9BVG8 833 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 PITPNM3Q9BZ71 974 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 NKRFO15226 690 aaKnown RBP eCLIP18.86■□□□□ 0.614e-8■□□□□ 10.3
CLSTN1-202ENST00000377298 EPM2AIP1Q7L775 607 aaPredicted RBP18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 MAML1Q92585 1016 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 KCNF1Q9H3M0 494 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 IL17RBQ9NRM6 502 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 TGFB3P10600 412 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 CCZ1BP86790 482 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 CCZ1P86791 482 aaPredicted RBP18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 PKN1Q16512 942 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 ANKS1AQ92625 1134 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 PIK3R2O00459 728 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 GPR182O15218 404 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 WEE2P0C1S8 567 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 NCF2P19878 526 aaPredicted RBP18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 GNL1P36915 607 aaPredicted RBP18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 HERVK_113P62684 666 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 VGLL2Q8N8G2 317 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 ASAP3Q8TDY4 903 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 WDR24Q96S15 920 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 MRIQ9BWK5 157 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 TRIM55Q9BYV6 548 aa18.86■□□□□ 0.61
CLSTN1-202ENST00000377298 MAPK13O15264 365 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 GARTP22102 1010 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 OR1G1P47890 313 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 COPS2P61201 443 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 YWHAHQ04917 246 aaPredicted RBP18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 METTL7BQ6UX53 244 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 FBXO16Q8IX29 292 aaPredicted RBP18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 EFHD1Q9BUP0 239 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 AGO4Q9HCK5 861 aaKnown RBP18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 HPSEQ9Y251 543 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 MMEP08473 750 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 GPAT2Q6NUI2 795 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 SLC4A9Q96Q91 983 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 FAM49BQ9NUQ9 324 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 AMACRQ9UHK6 382 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 SYNPO2Q9UMS6 1093 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 GYPCP04921 128 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 ART3Q13508 389 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 EFHC1Q5JVL4 640 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 ALDH1A1P00352 501 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 GYS2P54840 703 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 OCRLQ01968 901 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 MAPRE1Q15691 268 aaKnown RBP18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 OR6P1Q8NGX9 317 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 TMEM117Q9H0C3 514 aa18.85■□□□□ 0.61
CLSTN1-202ENST00000377298 CFAP69A5D8W1 941 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 NPTX2P47972 431 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 GIT2Q14161 759 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 PDCD7Q8N8D1 485 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 PCSK9Q8NBP7 692 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 PI4K2BG5E9Z4 385 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 PSMD3O43242 534 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 GTF2H1P32780 548 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 E4F1Q66K89 784 aaPredicted RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 STKLD1Q8NE28 680 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 ALKBH8Q96BT7 664 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 PCDHB7Q9Y5E2 793 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 THPOP40225 353 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 DEUP1Q05D60 604 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 EFHBQ8N7U6 833 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 DDX4Q9NQI0 724 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 CPSF2Q9P2I0 782 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 E5RI56 91 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms