RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 ZSCAN16Q9H4T2 348 aaPredicted RBP11.08□□□□□ -0.64
C9orf135-201ENST00000377197 KMT5AQ9NQR1 393 aa11.08□□□□□ -0.64
C9orf135-201ENST00000377197 RAB6BQ9NRW1 208 aa11.08□□□□□ -0.64
C9orf135-201ENST00000377197 PARP2Q9UGN5 583 aa11.08□□□□□ -0.64
C9orf135-201ENST00000377197 FAM50BQ9Y247 325 aa11.08□□□□□ -0.64
C9orf135-201ENST00000377197 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
C9orf135-201ENST00000377197 C2orf16Q68DN1 1984 aa11.08□□□□□ -0.64
C9orf135-201ENST00000377197 DENND4AQ7Z401 1863 aa11.08□□□□□ -0.64
C9orf135-201ENST00000377197 ANK1P16157 1881 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 HIDE1A8MVS5 230 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 K7ERI5 159 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 PER2O15055 1255 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 DCXO43602 365 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 TRAK2O60296 914 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 PLCG1P19174 1290 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 OR1G1P47890 313 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 NHLH1Q02575 133 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 CEBPZQ03701 1054 aaKnown RBP11.07□□□□□ -0.64
C9orf135-201ENST00000377197 GRIK3Q13003 919 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 SMAD4Q13485 552 aaKnown RBP11.07□□□□□ -0.64
C9orf135-201ENST00000377197 KARSQ15046 597 aaKnown RBP11.07□□□□□ -0.64
C9orf135-201ENST00000377197 PTPAQ15257 358 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 APBB1IPQ7Z5R6 666 aaPredicted RBP11.07□□□□□ -0.64
C9orf135-201ENST00000377197 DDX53Q86TM3 631 aaKnown RBP11.07□□□□□ -0.64
C9orf135-201ENST00000377197 RNF135Q8IUD6 432 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 COLGALT2Q8IYK4 626 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 VPS52Q8N1B4 723 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 ARHGAP28Q9P2N2 729 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 CD207Q9UJ71 328 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 BARX2Q9UMQ3 279 aaPredicted RBP11.07□□□□□ -0.64
C9orf135-201ENST00000377197 USP20Q9Y2K6 914 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 FAN1Q9Y2M0 1017 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 MUC6Q6W4X9 2439 aa11.07□□□□□ -0.64
C9orf135-201ENST00000377197 TCHHQ07283 1943 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.06□□□□□ -0.64
C9orf135-201ENST00000377197 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 POM121CA8CG34 1229 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 NRP1O14786 923 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 MBTPS2O43462 519 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 RECQL4O94761 1208 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 STAU1O95793 577 aaKnown RBP11.06□□□□□ -0.64
C9orf135-201ENST00000377197 ALDH2P05091 517 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 CTSAP10619 480 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 PLS3P13797 630 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
C9orf135-201ENST00000377197 TXLNAP40222 546 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 DSC1Q08554 894 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 ZNF568Q3ZCX4 644 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 EEF1DP3Q658K8 133 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 GPBP1Q86WP2 473 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 LRRC15Q8TF66 581 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 IRF7Q92985 503 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 MSLNLQ96KJ4 702 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 USP28Q96RU2 1077 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 MRPL4Q9BYD3 311 aaKnown RBP11.06□□□□□ -0.64
C9orf135-201ENST00000377197 CCSER1Q9C0I3 900 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 MARCH5Q9NX47 278 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 MIOSQ9NXC5 875 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 SNTG2Q9NY99 539 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 CLEC1BQ9P126 229 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 KCNG1Q9UIX4 513 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 FBXO2Q9UK22 296 aaPredicted RBP11.06□□□□□ -0.64
C9orf135-201ENST00000377197 ODF2LQ9ULJ1 636 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 TNFSF13BQ9Y275 285 aa11.06□□□□□ -0.64
C9orf135-201ENST00000377197 PRG3Q9Y2Y8 225 aaPredicted RBP11.06□□□□□ -0.64
C9orf135-201ENST00000377197 SRPRBQ9Y5M8 271 aaKnown RBP11.06□□□□□ -0.64
C9orf135-201ENST00000377197 NPHP3-ACAD11A0A0J9YXS1 232 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 H0YCG3 227 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 SLC16A4O15374 487 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 SMTNP53814 917 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 RBM10P98175 930 aaKnown RBP11.05□□□□□ -0.64
C9orf135-201ENST00000377197 STRN3Q13033 797 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 COASYQ13057 564 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 GIT2Q14161 759 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 DHX8Q14562 1220 aaKnown RBP11.05□□□□□ -0.64
C9orf135-201ENST00000377197 SMAD2Q15796 467 aaKnown RBP11.05□□□□□ -0.64
C9orf135-201ENST00000377197 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 ARSHQ5FYA8 562 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 SPECC1Q5M775 1068 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 NT5DC1Q5TFE4 455 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 LLGL2Q6P1M3 1020 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 TAS1R3Q7RTX0 852 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 PRICKLE2Q7Z3G6 844 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 CYP2U1Q7Z449 544 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 MRPL43Q8N983 215 aaKnown RBP11.05□□□□□ -0.64
C9orf135-201ENST00000377197 TMEM87AQ8NBN3 555 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 GSTCDQ8NEC7 633 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 VN1R2Q8NFZ6 395 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 LARP4BQ92615 738 aaKnown RBP11.05□□□□□ -0.64
C9orf135-201ENST00000377197 RAD54LQ92698 747 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 ACO2Q99798 780 aaKnown RBP11.05□□□□□ -0.64
C9orf135-201ENST00000377197 REEP2Q9BRK0 252 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 VN1R3Q9BXE9 311 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
C9orf135-201ENST00000377197 LARSQ9P2J5 1176 aaKnown RBP11.05□□□□□ -0.64
C9orf135-201ENST00000377197 CCDC39Q9UFE4 941 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms