RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SP2Q02086 613 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 CATSPER4Q7RTX7 472 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 NME8Q8N427 588 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 CFAP36Q96G28 342 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 CEP41Q9BYV8 373 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 G3BP2Q9UN86 482 aaKnown RBP12.41□□□□□ -0.42
DDR1-227ENST00000376570 FNDC3AQ9Y2H6 1198 aaKnown RBP12.41□□□□□ -0.42
DDR1-227ENST00000376570 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 GLI3P10071 1580 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 HNRNPH1P31943 449 aaKnown RBP12.41□□□□□ -0.42
DDR1-227ENST00000376570 SFNP31947 248 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 IREB2P48200 963 aaKnown RBP12.41□□□□□ -0.42
DDR1-227ENST00000376570 RPL7AP62424 266 aaKnown RBP12.41□□□□□ -0.42
DDR1-227ENST00000376570 EML3Q32P44 896 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 ZNF667Q5HYK9 610 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 IL31Q6EBC2 164 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 ATP6V1G3Q96LB4 118 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 CCDC77Q9BR77 488 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 SLC24A3Q9HC58 644 aa12.41□□□□□ -0.42
DDR1-227ENST00000376570 NPTXRO95502 500 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 ITGB3P05106 788 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 RARBP10826 455 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 FAM102AQ5T9C2 384 aaPredicted RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 WDR93Q6P2C0 686 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 ZNF449Q6P9G9 518 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 RFX8Q6ZV50 586 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 PALM2Q8IXS6 379 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 TMEM161BQ8NDZ6 487 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 EPS8L1Q8TE68 723 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 MPHOSPH6Q99547 160 aaKnown RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 PRMT1Q99873 361 aaKnown RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 IQCGQ9H095 443 aaKnown RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 ADGRA3Q8IWK6 1321 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 A0A087WZ62 844 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 EIF3DO15371 548 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDR1-227ENST00000376570 OATP04181 439 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 RARAP10276 462 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 CYP2B6P20813 491 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 CACNB2Q08289 660 aaPredicted RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 ZBED8Q8IZ13 594 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 CACNA2D3Q8IZS8 1091 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 CCNYQ8ND76 341 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 WHAMMQ8TF30 809 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 ANKRD36BP1Q96IX9 119 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 FDXACB1Q9BRP7 624 aaPredicted RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 MED10Q9BTT4 135 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 EDEM3Q9BZQ6 932 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 KIAA1683Q9H0B3 1180 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 FAM114A2Q9NRY5 505 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 PSD3Q9NYI0 1048 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 TMEM253P0C7T8 217 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 ADSSP30520 456 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 RABGGTBP53611 331 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 CYP24A1Q07973 514 aa12.4□□□□□ -0.42
DDR1-227ENST00000376570 HIBCHQ6NVY1 386 aaPredicted RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 TBC1D1Q86TI0 1168 aaPredicted RBP12.4□□□□□ -0.42
DDR1-227ENST00000376570 F8VP50 259 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 EIF3HO15372 352 aaKnown RBP eCLIP12.39□□□□□ -0.435e-6■■■□□ 14.9
DDR1-227ENST00000376570 RNF8O76064 485 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 CST3P01034 146 aaPredicted RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 LSP1P33241 339 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 P3H1Q32P28 736 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 C9orf131Q5VYM1 1079 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 VSIG10LQ86VR7 867 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 N4BP2L2Q92802 583 aaPredicted RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 TMEM121Q9BTD3 319 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 TMEM8AQ9HCN3 771 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 SIX2Q9NPC8 291 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 DCTN4Q9UJW0 460 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 ZNF536O15090 1300 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 LCP1P13796 627 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 UBA1P22314 1058 aaKnown RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 RPL21P46778 160 aaKnown RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 GPC3P51654 580 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 ARSEP51690 589 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 ITGA8P53708 1063 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 MAPK7Q13164 816 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 PPP2R5AQ15172 486 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 UBAP2Q5T6F2 1119 aaKnown RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 IZUMO3Q5VZ72 239 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 EEF1DP3Q658K8 133 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 DARS2Q6PI48 645 aaKnown RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 AFG1LQ8WV93 481 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 SEPT1Q8WYJ6 367 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 CDHR1Q96JP9 859 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 CCT8L2Q96SF2 557 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 FAM53CQ9NYF3 392 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 CACNG4Q9UBN1 327 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 NOD1Q9Y239 953 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 UBE4BO95155 1302 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 TARSL2A2RTX5 802 aaKnown RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 ZNF131P52739 623 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 SESN3P58005 492 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 HHATQ5VTY9 493 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms