RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 PARP6Q2NL67 630 aa12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 EPC2Q52LR7 807 aa12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 CAPN12Q6ZSI9 719 aa12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 SYCP3Q8IZU3 236 aa12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 C4orf33Q8N1A6 199 aa12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 FAM163AQ96GL9 167 aaPredicted RBP12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 LRRC37BQ96QE4 947 aa12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 POLR3CQ9BUI4 534 aaPredicted RBP12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 EURLQ9NYK6 297 aa12.23□□□□□ -0.45
TM9SF2-201ENST00000376387 GNPATO15228 680 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 ASMTLO95671 621 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 SETSIPP0DME0 302 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 MYCLP1P12525 358 aaPredicted RBP12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 GTF2IP78347 998 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 ASAP3Q8TDY4 903 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 CBWD1Q9BRT8 395 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 TBX3O15119 743 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 MTA2O94776 668 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 EEF2P13639 858 aaKnown RBP12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 IL1R1P14778 569 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 ATP6V1C1P21283 382 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 ZNF76P36508 570 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 SREBF1P36956 1147 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 NFIL3Q16649 462 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 MAML1Q92585 1016 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 FAM20AQ96MK3 541 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 KCNQ5Q9NR82 932 aa12.22□□□□□ -0.45
TM9SF2-201ENST00000376387 ADAMTSL1Q8N6G6 1762 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 FAM47DPA6NHR8 397 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 CYP1A2P05177 515 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 ATF2P15336 505 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 RPA3P35244 121 aaPredicted RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 SCNN1DP51172 638 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 YARSP54577 528 aaKnown RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 MXRA7P84157 204 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 IL9RQ01113 521 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 PTK6Q13882 451 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 KHDC1Q4VXA5 237 aaKnown RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 TAF1BQ53T94 588 aaPredicted RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 TMEM154Q6P9G4 183 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 OTOP1Q7RTM1 612 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 ANKS1BQ7Z6G8 1248 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 DHX38Q92620 1227 aaKnown RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 FAM84AQ96KN4 292 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 ZCWPW1Q9H0M4 648 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 POLLQ9UGP5 575 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 SMIM24O75264 130 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 CDH16O75309 829 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 PIAS1O75925 651 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 RFC5P40937 340 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 NFIAQ12857 509 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 AP3B2Q13367 1082 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 SLC1A5Q15758 541 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 PKN2Q16513 984 aaKnown RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 PPM1KQ8N3J5 372 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 TEX9Q8N6V9 391 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 SEMA4DQ92854 862 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 SLCO2A1Q92959 643 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 MIPEPQ99797 713 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 DCLK3Q9C098 648 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 IRF2BPLQ9H1B7 796 aa12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 FBXO9Q9UK97 447 aaPredicted RBP12.21□□□□□ -0.45
TM9SF2-201ENST00000376387 IGLV3-22A0A075B6J6 115 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 A0A1W2PRG0 241 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 POC1B-GALNT4F8VUJ3 575 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 FESP07332 822 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 VAMP7P51809 220 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 RASA3Q14644 834 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 FASTKD3Q14CZ7 662 aaKnown RBP12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 SLC15A2Q16348 729 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 SYDE2Q5VT97 1194 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 DAW1Q8N136 415 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 AGGF1Q8N302 714 aaeCLIP12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 GLIS1Q8NBF1 620 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 SH2D3AQ9BRG2 576 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 MOV10L1Q9BXT6 1211 aaKnown RBP12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 C12orf65Q9H3J6 166 aaKnown RBP12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 STARD13Q9Y3M8 1113 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 USH1CQ9Y6N9 552 aa12.21□□□□□ -0.46
TM9SF2-201ENST00000376387 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 GOLGA8IPA6NC78 632 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 GOLGA8JA6NMD2 632 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 TCEA3O75764 348 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 SNUPNO95149 360 aaKnown RBP12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 RAB27AP51159 221 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 CACNB3P54284 484 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 PLEKHG4Q58EX7 1191 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 C11orf96Q7Z7L8 435 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 DENND1AQ8TEH3 1009 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 C10orf82Q8WW14 230 aa12.2□□□□□ -0.46
TM9SF2-201ENST00000376387 TSC22D3Q99576 134 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms