RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 E2F5Q15329 346 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 TMEM63BQ5T3F8 832 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 WLSQ5T9L3 541 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 TBC1D1Q86TI0 1168 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 TAX1BP1Q86VP1 789 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 MCF2L2Q86YR7 1114 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 GDAP1Q8TB36 358 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 PDCD2LQ9BRP1 358 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 KCNK9Q9NPC2 374 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 HOMER3Q9NSC5 361 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 NINJ2Q9NZG7 142 aa13.22□□□□□ -0.29
TNFSF13B-201ENST00000375887 BRWD3Q6RI45 1802 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 UMODL1Q5DID0 1318 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 ASNSP08243 561 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 GCNT1Q02742 428 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 C15orf39Q6ZRI6 1047 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 PASD1Q8IV76 773 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 DYDC1Q8WWB3 177 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 TCP11Q8WWU5 503 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 CEP170P1Q96L14 293 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 TIPINQ9BVW5 301 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 ANAPC5Q9UJX4 755 aa13.21□□□□□ -0.29
TNFSF13B-201ENST00000375887 PTPRJQ12913 1337 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 FDX1P10109 184 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 KCNJ2P63252 427 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 NUGGCQ68CJ6 796 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 ATL2Q8NHH9 583 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 C9orf72Q96LT7 481 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 XPNPEP1Q9NQW7 623 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 PXMP2Q9NR77 195 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 RIPK3Q9Y572 518 aa13.21□□□□□ -0.3
TNFSF13B-201ENST00000375887 THAP12O43422 761 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 ATP6V1G2O95670 118 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 GSTA1P08263 222 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 CLTAP09496 248 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 BRAFP15056 766 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 JAK3P52333 1124 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 FAM182AQ5T1J6 154 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 MON1BQ7L1V2 547 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 GLIS1Q8NBF1 620 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 PLVAPQ9BX97 442 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 NAALADL1Q9UQQ1 740 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 USP15Q9Y4E8 981 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 COL4A5P29400 1685 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 PLSCR1O15162 318 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 CYP1A1P04798 512 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 ATF2P15336 505 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 GTF2H1P32780 548 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 GALNTL6Q49A17 601 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 CGB2Q6NT52 195 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 PNMA8AQ86V59 439 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 CCDC50Q8IVM0 306 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 CKAP2Q8WWK9 683 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 SPIRE2Q8WWL2 714 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 C11orf70Q9BRQ4 267 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 TRAIPQ9BWF2 469 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 ADAM33Q9BZ11 813 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 NOD2Q9HC29 1040 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 BAIAP2L1Q9UHR4 511 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 MCM8Q9UJA3 840 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 PCDHB2Q9Y5E7 798 aa13.2□□□□□ -0.3
TNFSF13B-201ENST00000375887 PROSCO94903 275 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 TCF4P15884 667 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 CD58P19256 250 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 NF2P35240 595 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 ACOT2P49753 483 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 NCALDP61601 193 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 KRT76Q01546 638 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 TDRD10Q5VZ19 366 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 FLAD1Q8NFF5 587 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 APOBEC3GQ9HC16 384 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 TCEAL9Q9UHQ7 104 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 PCDHA10Q9Y5I2 948 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 RGS20O76081 388 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 VNN1O95497 513 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 GAS8O95995 478 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 ACO1P21399 889 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 SFNP31947 248 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 NSFP46459 744 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 CENPCQ03188 943 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAMLD1Q13495 774 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms