RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 MAP3K7O43318 606 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 DCTN3O75935 186 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 FGGP02679 453 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 DHX34Q14147 1143 aaKnown RBP12.92□□□□□ -0.34
C9orf3-203ENST00000375315 SNRNP48Q6IEG0 339 aaKnown RBP12.92□□□□□ -0.34
C9orf3-203ENST00000375315 TPCN2Q8NHX9 752 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 IL31RAQ8NI17 732 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 C7orf25Q9BPX7 421 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 SNX24Q9Y343 169 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 PITPNM2Q9BZ72 1349 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 NPHP3-ACAD11A0A0J9YXS1 232 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 hCG_1984214I3L0E3 225 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 CLK2P49760 499 aaKnown RBP12.92□□□□□ -0.34
C9orf3-203ENST00000375315 PABPC4Q13310 644 aaKnown RBP eCLIP12.92□□□□□ -0.34
C9orf3-203ENST00000375315 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 LRRC74BQ6ZQY2 392 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 ZNF713Q8N859 430 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-203ENST00000375315 MAGEB18Q96M61 343 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 PITPNM3Q9BZ71 974 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 KIAA1683Q9H0B3 1180 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-203ENST00000375315 MRPL11Q9Y3B7 192 aaKnown RBP12.92□□□□□ -0.34
C9orf3-203ENST00000375315 USH1CQ9Y6N9 552 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
C9orf3-203ENST00000375315 ZBTB39O15060 712 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 ZBTB48P10074 688 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 INHBCP55103 352 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 BPIFB4P59827 614 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 LRRC63Q05C16 580 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 RCN1Q15293 331 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 LRRC41Q15345 812 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 ARHGEF18Q6ZSZ5 1173 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 OTUD6AQ7L8S5 288 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 MLXIPLQ9NP71 852 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 IL1RAPL1Q9NZN1 696 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 WDR46O15213 610 aaKnown RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 RIPK2O43353 540 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 ZBED4O75132 1171 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 LIN52Q52LA3 116 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 FAM160B2Q86V87 743 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 FAM133AQ8N9E0 248 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 TAAR1Q96RJ0 339 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 TSG101Q99816 390 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 ZNF646O15015 1829 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 RPS6P62753 249 aaKnown RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 SLC34A1Q06495 639 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 MPP3Q13368 585 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 CTTNQ14247 550 aaKnown RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 ZNF449Q6P9G9 518 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 ZDHHC24Q6UX98 284 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 EEPD1Q7L9B9 569 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 JAMLQ86YT9 394 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 KIAA0895Q8NCT3 520 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 CDCA5Q96FF9 252 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 AS3MTQ9HBK9 375 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 AMFRQ9UKV5 643 aa12.91□□□□□ -0.34
C9orf3-203ENST00000375315 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
C9orf3-203ENST00000375315 BRCA1P38398 1863 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 HNRNPRO43390 633 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 GNA14O95837 355 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 UBTFL6P0CB48 400 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 ARP10275 920 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 FGFR4P22455 802 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 STRN3Q13033 797 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 CGB2Q6NT52 195 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 PPP1R18Q6NYC8 613 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 VSTM1Q6UX27 236 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 HS2ST1Q7LGA3 356 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 PASKQ96RG2 1323 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 YIPF2Q9BWQ6 316 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 MAF1Q9H063 256 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 RANBP17Q9H2T7 1088 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 RRAGCQ9HB90 399 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 ZNF536O15090 1300 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 TRAFD1O14545 582 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 KIAA0391O15091 583 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 MSH4O15457 936 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 HNRNPCL1O60812 293 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 NOL4O94818 638 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 LYNP07948 512 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 RARGP13631 454 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 PTPN4P29074 926 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 PSMC6P62333 389 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 AP1B1Q10567 949 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 GRB10Q13322 594 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms