RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 NR1I3Q14994 352 aa18.95■□□□□ 0.62
PFDN6-201ENST00000374606 WDR49Q8IV35 697 aa18.95■□□□□ 0.62
PFDN6-201ENST00000374606 SMG8Q8ND04 991 aaKnown RBP18.95■□□□□ 0.62
PFDN6-201ENST00000374606 UBE2ZQ9H832 354 aaPredicted RBP18.95■□□□□ 0.62
PFDN6-201ENST00000374606 CD320Q9NPF0 282 aa18.95■□□□□ 0.62
PFDN6-201ENST00000374606 C1orf112Q9NSG2 853 aa18.95■□□□□ 0.62
PFDN6-201ENST00000374606 INTS13Q9NVM9 706 aa18.95■□□□□ 0.62
PFDN6-201ENST00000374606 TEX33O43247 280 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 ITGA4P13612 1032 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 TNNI1P19237 187 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 FMO5P49326 533 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 MXI1P50539 228 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 WNT7BP56706 349 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 MCCD1P59942 119 aaPredicted RBP18.94■□□□□ 0.62
PFDN6-201ENST00000374606 C1orf220Q5T0J3 134 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 CD302Q8IX05 232 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 LINC01599Q8WXQ3 324 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 SNX27Q96L92 541 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 TGS1Q96RS0 853 aaKnown RBP18.94■□□□□ 0.62
PFDN6-201ENST00000374606 ASB7Q9H672 318 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 RGS18Q9NS28 235 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 PARP2Q9UGN5 583 aa18.94■□□□□ 0.62
PFDN6-201ENST00000374606 A0A0U1RQF3 1178 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 ZNF623O75123 536 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 IBSPP21815 317 aaPredicted RBP18.93■□□□□ 0.62
PFDN6-201ENST00000374606 AKAP5P24588 427 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 GTF2H1P32780 548 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 GCLMP48507 274 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 CLDN10P78369 228 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 DEFB103AP81534 67 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 PPP3CAQ08209 521 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 SLC10A6Q3KNW5 377 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 CNKSR3Q6P9H4 555 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 SLC24A5Q71RS6 500 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 TMCO2Q7Z6W1 182 aaPredicted RBP18.93■□□□□ 0.62
PFDN6-201ENST00000374606 PGBD4Q96DM1 585 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 POP1Q99575 1024 aaKnown RBP18.93■□□□□ 0.62
PFDN6-201ENST00000374606 PLEKHA5Q9HAU0 1116 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 MTUS1Q9ULD2 1270 aa18.93■□□□□ 0.62
PFDN6-201ENST00000374606 PDCD11Q14690 1871 aaKnown RBP18.92■□□□□ 0.62
PFDN6-201ENST00000374606 TTC26A0AVF1 554 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 LACTBL1A8MY62 500 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 PRR33A8MZF0 331 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 MEFVO15553 781 aaPredicted RBP18.92■□□□□ 0.62
PFDN6-201ENST00000374606 GJB5O95377 273 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 CDC25BP30305 580 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 AP3M2P53677 418 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 ERVK-21P61565 698 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 LEXMQ3ZCV2 418 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 CBWD6Q4V339 395 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 CBWD3Q5JTY5 395 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 CBWD5Q5RIA9 395 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 LMBRD2Q68DH5 695 aaPredicted RBP18.92■□□□□ 0.62
PFDN6-201ENST00000374606 KRT39Q6A163 491 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.92■□□□□ 0.62
PFDN6-201ENST00000374606 MRPL10Q7Z7H8 261 aaKnown RBP18.92■□□□□ 0.62
PFDN6-201ENST00000374606 ECHDC2Q86YB7 292 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 GJD3Q8N144 294 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 RNF169Q8NCN4 708 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 RAD9AQ99638 391 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 TMEM8AQ9HCN3 771 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 PTPRJQ12913 1337 aa18.92■□□□□ 0.62
PFDN6-201ENST00000374606 MICAL3Q7RTP6 2002 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 ABHD14A-ACY1A0A1B0GW23 586 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 A0A1W2PQC6 194 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 GTPBP10A4D1E9 387 aaKnown RBP18.91■□□□□ 0.62
PFDN6-201ENST00000374606 C9IYK1 514 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 P4HA2O15460 535 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 NFICP08651 508 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 TMEM191BP0C7N4 346 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 TFAMQ00059 246 aaKnown RBP18.91■□□□□ 0.62
PFDN6-201ENST00000374606 CETN1Q12798 172 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 TMEM132DQ14C87 1099 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 SYCP1Q15431 976 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 JADE1Q6IE81 842 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 NT5DC4Q86YG4 428 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 EFCAB13Q8IY85 973 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 LPPQ93052 612 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 ANKRD36BP1Q96IX9 119 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 PCMTD1Q96MG8 357 aaPredicted RBP18.91■□□□□ 0.62
PFDN6-201ENST00000374606 ERGIC2Q96RQ1 377 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 TMEM117Q9H0C3 514 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 KLK14Q9P0G3 267 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 GCNT4Q9P109 453 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 CNTN3Q9P232 1028 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 C2CD2Q9Y426 696 aa18.91■□□□□ 0.62
PFDN6-201ENST00000374606 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.9■□□□□ 0.62
PFDN6-201ENST00000374606 LINC01553A4QN01 128 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 EFCAB14O75071 495 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 TNNC2P02585 160 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 ATF7P17544 494 aaPredicted RBP18.9■□□□□ 0.62
PFDN6-201ENST00000374606 KCNA5P22460 613 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 PBX1P40424 430 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 MLH1P40692 756 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 BIRC3Q13489 604 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 PTPN21Q16825 1174 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 GBP6Q6ZN66 633 aa18.9■□□□□ 0.62
PFDN6-201ENST00000374606 RTN4RL1Q86UN2 441 aaPredicted RBP18.9■□□□□ 0.62
PFDN6-201ENST00000374606 ALYREFQ86V81 257 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms