RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SCP2P22307 547 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 NAMPTP43490 491 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 ACOT2P49753 483 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 FMO1Q01740 532 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 ZNF211Q13398 564 aaPredicted RBP12.96□□□□□ -0.33
HMGCL-202ENST00000374487 TCEAL1Q15170 157 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 SLFN12LQ6IEE8 588 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 DIS3LQ8TF46 1054 aaKnown RBP12.96□□□□□ -0.33
HMGCL-202ENST00000374487 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
HMGCL-202ENST00000374487 FAM81BQ96LP2 452 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 TINF2Q9BSI4 451 aa12.96□□□□□ -0.33
HMGCL-202ENST00000374487 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.33
HMGCL-202ENST00000374487 UTP11Q9Y3A2 253 aaKnown RBP12.96□□□□□ -0.33
HMGCL-202ENST00000374487 KIAA0391O15091 583 aaKnown RBP12.96□□□□□ -0.34
HMGCL-202ENST00000374487 ADCY6O43306 1168 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.34
HMGCL-202ENST00000374487 GJB1P08034 283 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 CYBAP13498 195 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.34
HMGCL-202ENST00000374487 ACTN2P35609 894 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 GCNT1Q02742 428 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 BIRC3Q13489 604 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 NEDD9Q14511 834 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 PPP2R5EQ16537 467 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 DCAF12L1Q5VU92 463 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 MFSD14CQ5VZR4 134 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 FAM160B1Q5W0V3 765 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 OLFML2BQ68BL8 750 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 LHX8Q68G74 356 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 ADAT2Q7Z6V5 191 aaKnown RBP12.96□□□□□ -0.34
HMGCL-202ENST00000374487 ASAP3Q8TDY4 903 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 PSPC1Q8WXF1 523 aaKnown RBP12.96□□□□□ -0.34
HMGCL-202ENST00000374487 ZNF653Q96CK0 615 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 ZIM3Q96PE6 472 aa12.96□□□□□ -0.34
HMGCL-202ENST00000374487 NIFKQ9BYG3 293 aaKnown RBP12.96□□□□□ -0.34
HMGCL-202ENST00000374487 TTI1O43156 1089 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
HMGCL-202ENST00000374487 CLSTN1O94985 981 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 GLRA2P23416 452 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 COPB2P35606 906 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 RFC5P40937 340 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 STAT5BP51692 787 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 PSMD6Q15008 389 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 ZSCAN26Q16670 478 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
HMGCL-202ENST00000374487 MREGQ8N565 214 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 ALG3Q92685 438 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 RPS6KC1Q96S38 1066 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 NUP85Q9BW27 656 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 CALCOCO1Q9P1Z2 691 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 ANKFY1Q9P2R3 1169 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 KIAA1217Q5T5P2 1943 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 DNAH12Q6ZR08 3092 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
HMGCL-202ENST00000374487 SPOPO43791 374 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 FARP2O94887 1054 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 COMTP21964 271 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 ARL2P36404 184 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 PIK3CAP42336 1068 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 GJA8P48165 433 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 NLRP11P59045 1033 aaKnown RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 IQCKQ8N0W5 287 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 ZNF564Q8TBZ8 553 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 ZNF516Q92618 1163 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 MSTO1Q9BUK6 570 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 RBAKQ9NYW8 714 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 STYXL1Q9Y6J8 313 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 LCTP09848 1927 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 IGKV6D-21A0A0A0MT36 114 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 GSTTP1A0A1W2PQM5 241 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 ZNF865P0CJ78 1059 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 TGFB3P10600 412 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 HNRNPH2P55795 449 aaKnown RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 ACAD10Q6JQN1 1059 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 ARMCX2Q7L311 632 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 MPHOSPH6Q99547 160 aaKnown RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 ZSWIM1Q9BR11 485 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 TARS2Q9BW92 718 aaKnown RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 CELF4Q9BZC1 486 aaKnown RBP12.94□□□□□ -0.34
HMGCL-202ENST00000374487 WNT8AQ9H1J5 351 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 AZI2Q9H6S1 392 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 UVRAGQ9P2Y5 699 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 GTF3C4Q9UKN8 822 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
HMGCL-202ENST00000374487 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 DAPK3O43293 454 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 MTA2O94776 668 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 GGPS1O95749 300 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 KRT14P02533 472 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 CYP1A2P05177 515 aa12.93□□□□□ -0.34
HMGCL-202ENST00000374487 TCF7P36402 384 aaPredicted RBP12.93□□□□□ -0.34
HMGCL-202ENST00000374487 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms