RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 MCEEQ96PE7 176 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 FDXACB1Q9BRP7 624 aaPredicted RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 CALN1Q9BXU9 219 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 TAF1DQ9H5J8 278 aaPredicted RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 FAM49BQ9NUQ9 324 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 PJA2O43164 708 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 GTF2BQ00403 316 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 CALCOCO2Q13137 446 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 COBLL1Q53SF7 1204 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 PSPC1Q8WXF1 523 aaKnown RBP11.52□□□□□ -0.56
CXCL12-203ENST00000374429 SEPT1Q8WYJ6 367 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 HSPH1Q92598 858 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 LPIN3Q9BQK8 851 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 MIS12Q9H081 205 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 CHST7Q9NS84 486 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 IRAK4Q9NWZ3 460 aa11.52□□□□□ -0.56
CXCL12-203ENST00000374429 PRKCBP05771 671 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 PDGFRBP09619 1106 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 ETS1P14921 441 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 RPS12P25398 132 aaKnown RBP11.52□□□□□ -0.57
CXCL12-203ENST00000374429 JAM2P57087 298 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 CAPSQ13938 189 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 BSPRYQ5W0U4 402 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 SYN2Q92777 582 aaPredicted RBP11.52□□□□□ -0.57
CXCL12-203ENST00000374429 SEMA4AQ9H3S1 761 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 TMEM8AQ9HCN3 771 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.52□□□□□ -0.57
CXCL12-203ENST00000374429 COL24A1Q17RW2 1714 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 C19orf81C9J6K1 198 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 POC1B-GALNT4F8VUJ3 575 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 DYNC1LI2O43237 492 aaPredicted RBP11.52□□□□□ -0.57
CXCL12-203ENST00000374429 MAPTP10636 758 aaKnown RBP11.52□□□□□ -0.57
CXCL12-203ENST00000374429 RALAP11233 206 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 LONRF1Q17RB8 773 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 TAS1R3Q7RTX0 852 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 GDAP1Q8TB36 358 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 HEXIM2Q96MH2 286 aaKnown RBP11.52□□□□□ -0.57
CXCL12-203ENST00000374429 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.57
CXCL12-203ENST00000374429 HAPLN2Q9GZV7 340 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 SPON1Q9HCB6 807 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 DMAC2Q9NW81 257 aa11.52□□□□□ -0.57
CXCL12-203ENST00000374429 TTC36A6NLP5 189 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 FZD9O00144 591 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 CHRNB2P17787 502 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 RABGGTBP53611 331 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 ZNF280AP59817 542 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 LAMTOR4Q0VGL1 99 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 BMT2Q1RMZ1 405 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 ABHD15Q6UXT9 468 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 ZNF365Q70YC5 407 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 ZBTB8OSQ8IWT0 167 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 HNRNPLLQ8WVV9 542 aaKnown RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 MINDY3Q9H8M7 445 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 MTUS1Q9ULD2 1270 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 CCDC189A1A4V9 331 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 RTN2O75298 545 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 ZNF699Q32M78 642 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 LRRC57Q8N9N7 239 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 NEK9Q8TD19 979 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 AENQ8WTP8 325 aaKnown RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 GPRASP2Q96D09 838 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 PBKQ96KB5 322 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 MKNK1Q9BUB5 465 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 APOBEC3GQ9HC16 384 aaKnown RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 CPA4Q9UI42 421 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 PNMA2Q9UL42 364 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 COL11A2P13942 1736 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 F8VP50 259 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 NR1D1P20393 614 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 GPAT2Q6NUI2 795 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 LRRC31Q6UY01 552 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 MAP4K3Q8IVH8 894 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 LMO3Q8TAP4 145 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 ATP8B4Q8TF62 1192 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 CDHR1Q96JP9 859 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 DDX23Q9BUQ8 820 aaKnown RBP11.51□□□□□ -0.57
CXCL12-203ENST00000374429 SETD4Q9NVD3 440 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 PGAP2Q9UHJ9 254 aa11.51□□□□□ -0.57
CXCL12-203ENST00000374429 BANF1O75531 89 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 ITGB3P05106 788 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 RARAP10276 462 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 PHKA2P46019 1235 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 KYNUQ16719 465 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 CPLX4Q7Z7G2 160 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 KAT6AQ92794 2004 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 LY75O60449 1722 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 IVLP07476 585 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 INSRRP14616 1297 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 CYP2B6P20813 491 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms