RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 TRIM11Q96F44 468 aa12.55□□□□□ -0.4
PACSIN1-202ENST00000374043 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
PACSIN1-202ENST00000374043 AGAP1Q9UPQ3 857 aa12.55□□□□□ -0.4
PACSIN1-202ENST00000374043 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 CAND2O75155 1236 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 VTNP04004 478 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 IZUMO3Q5VZ72 239 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ACAD10Q6JQN1 1059 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 DARS2Q6PI48 645 aaKnown RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 EPM2AIP1Q7L775 607 aaPredicted RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 KREMEN1Q96MU8 473 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 CCT8L2Q96SF2 557 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ALG13Q9NP73 1137 aaKnown RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 MYH8P13535 1937 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 GOLGA8RI6L899 631 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 PIAS1O75925 651 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 FDX1P10109 184 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 P4HA1P13674 534 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 RFX1P22670 979 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 MAPK7Q13164 816 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 FAM102AQ5T9C2 384 aaPredicted RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 RHOT1Q8IXI2 618 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 TCP11Q8WWU5 503 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 AHDC1Q5TGY3 1603 aaPredicted RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 TCRBV7S2A1N4TA0A589 114 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 IRX4P78413 519 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 CUL2Q13617 745 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 SRLQ86TD4 932 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 CEP120Q8N960 986 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 OR5B17Q8NGF7 314 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ACTRT1Q8TDG2 376 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 CPB2Q96IY4 423 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 MED10Q9BTT4 135 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 OSBPL8Q9BZF1 889 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ERVK-5Q9HDB9 667 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 SIX2Q9NPC8 291 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 GTF3C4Q9UKN8 822 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 COG5Q9UP83 839 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 PFASO15067 1338 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 TNFSF9P41273 254 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 PRKCIP41743 596 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ARSEP51690 589 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 ASTE1Q2TB18 679 aaPredicted RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 RUNDC3BQ96NL0 473 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 GINM1Q9NU53 330 aa12.54□□□□□ -0.4
PACSIN1-202ENST00000374043 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 PSMC4P43686 418 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 HSD17B4P51659 736 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 TTLL4Q14679 1199 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 SLMAPQ14BN4 828 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 EFCC1Q9HA90 598 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 RARAP10276 462 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 ATP5DP30049 168 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 P3H1Q32P28 736 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 ZBED8Q8IZ13 594 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 NME8Q8N427 588 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 TBC1D31Q96DN5 1066 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 KLF6Q99612 283 aaPredicted RBP12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 SPATC1LQ9H0A9 340 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 ATP2A2P16615 1042 aaKnown RBP12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 GTF2A1P52655 376 aaPredicted RBP12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 ITGA8P53708 1063 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 TGFB2P61812 414 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 CALR3Q96L12 384 aaKnown RBP12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 UVRAGQ9P2Y5 699 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 NOD1Q9Y239 953 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 SCINQ9Y6U3 715 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 C4AP0C0L4 1744 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
PACSIN1-202ENST00000374043 NFKBIEO00221 500 aa12.52□□□□□ -0.4
PACSIN1-202ENST00000374043 MAFGO15525 162 aa12.52□□□□□ -0.4
PACSIN1-202ENST00000374043 ITGB3P05106 788 aa12.52□□□□□ -0.4
PACSIN1-202ENST00000374043 CXCL8P10145 99 aa12.52□□□□□ -0.4
PACSIN1-202ENST00000374043 KRT3P12035 628 aa12.52□□□□□ -0.4
PACSIN1-202ENST00000374043 BRAFP15056 766 aa12.52□□□□□ -0.4
PACSIN1-202ENST00000374043 CHN1P15882 459 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms