RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 TMEM60Q9H2L4 133 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 GOPCQ9HD26 462 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 BLOC1S6Q9UL45 172 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 SSX2IPQ9Y2D8 614 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 ADGRA3Q8IWK6 1321 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 DDX3YO15523 660 aaKnown RBP15.25■□□□□ 0.03
A1CF-202ENST00000373993 PDHA1P08559 390 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 RASA1P20936 1047 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 IFNAR2P48551 515 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 FLT3LGP49771 235 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 DNA2P51530 1060 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 PLTPP55058 493 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 PTK2Q05397 1052 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 SLC34A1Q06495 639 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 MYBPC3Q14896 1274 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 DBN1Q16643 649 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 ANKRD35Q8N283 1001 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 LRRC43Q8N309 656 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 RFFLQ8WZ73 363 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 SLC7A6OSQ96CW6 309 aaPredicted RBP15.25■□□□□ 0.03
A1CF-202ENST00000373993 PITPNM3Q9BZ71 974 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 RAB34Q9BZG1 259 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 SEMA4AQ9H3S1 761 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 EMILIN3Q9NT22 766 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 DNAAF2Q9NVR5 837 aaKnown RBP15.25■□□□□ 0.03
A1CF-202ENST00000373993 NMRK1Q9NWW6 199 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 WHRNQ9P202 907 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 STX18Q9P2W9 335 aaKnown RBP15.25■□□□□ 0.03
A1CF-202ENST00000373993 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 PCDHA3Q9Y5H8 950 aa15.25■□□□□ 0.03
A1CF-202ENST00000373993 GTPBP10A4D1E9 387 aaKnown RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 A8MXQ7 604 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 DESP17661 470 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 CTNNA2P26232 953 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 STX2P32856 288 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
A1CF-202ENST00000373993 GABPAQ06546 454 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 TMED1Q13445 227 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 ITGA9Q13797 1035 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 RNF220Q5VTB9 566 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 USP17L2Q6R6M4 530 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 SYDE1Q6ZW31 735 aaPredicted RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 ZNF571Q7Z3V5 609 aaPredicted RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 RMDN2Q96LZ7 410 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 P2RX7Q99572 595 aaKnown RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 SPATA16Q9BXB7 569 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 CELF4Q9BZC1 486 aaKnown RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 ITGB1BP2Q9UKP3 347 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 ZMYND8Q9ULU4 1186 aaPredicted RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 ELNP15502 786 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 CD151P48509 253 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 GIT2Q14161 759 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 MAP7Q14244 749 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 C4orf50Q6ZRC1 276 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 FRMD5Q7Z6J6 570 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 LONP2Q86WA8 852 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 CLEC10AQ8IUN9 316 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 FAM133AQ8N9E0 248 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 PIP4K2CQ8TBX8 421 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 LRRC15Q8TF66 581 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 GFM2Q969S9 779 aaKnown RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 COA7Q96BR5 231 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 TRIM51Q9BSJ1 452 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 DDX23Q9BUQ8 820 aaKnown RBP15.24■□□□□ 0.03
A1CF-202ENST00000373993 LRRC4CQ9HCJ2 640 aa15.24■□□□□ 0.03
A1CF-202ENST00000373993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.24■□□□□ 0.03
A1CF-202ENST00000373993 USP17L12C9JPN9 530 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 USP17L21D6R901 530 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 STRNO43815 780 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 TMCC1O94876 653 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 TAC1P20366 129 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 MUTP22033 750 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 DEUP1Q05D60 604 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 MGAT5Q09328 741 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 CCDC6Q16204 474 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 SNX30Q5VWJ9 437 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 RELL1Q8IUW5 271 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 ANKLE1Q8NAG6 615 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 LARP4BQ92615 738 aaKnown RBP15.23■□□□□ 0.03
A1CF-202ENST00000373993 MYLK2Q9H1R3 596 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 SYNCQ9H7C4 482 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 PPCSQ9HAB8 311 aa15.23■□□□□ 0.03
A1CF-202ENST00000373993 MYMKA6NI61 221 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 PP2D1A8MPX8 630 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 ADCY3O60266 1144 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 CCDC22O60826 627 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 ATP9AO75110 1047 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 RCN2Q14257 317 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 PHLDB3Q6NSJ2 640 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 DPY19L2P1Q6NXN4 242 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 NME8Q8N427 588 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 C12orf50Q8NA57 414 aaPredicted RBP15.22■□□□□ 0.03
A1CF-202ENST00000373993 EPS8L3Q8TE67 593 aaKnown RBP15.22■□□□□ 0.03
A1CF-202ENST00000373993 CCDC77Q9BR77 488 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 FOXP3Q9BZS1 431 aa15.22■□□□□ 0.03
A1CF-202ENST00000373993 UBE2OQ9C0C9 1292 aaKnown RBP15.22■□□□□ 0.03
A1CF-202ENST00000373993 DENND2DQ9H6A0 471 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms