RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 NCOA4Q13772 614 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 HHIPL2Q6UWX4 724 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 RAB44Q7Z6P3 723 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 ATG4AQ8WYN0 398 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 MCEEQ96PE7 176 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 KCNH7Q9NS40 1196 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 PFDN6O15212 129 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 APOEP02649 317 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 STAT5BP51692 787 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 MDH1BQ5I0G3 518 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 METTL23Q86XA0 190 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 RNF139Q8WU17 664 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 SERPINI1Q99574 410 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 TRIM56Q9BRZ2 755 aaKnown RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 PCDHB2Q9Y5E7 798 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 GRAP2O75791 330 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 HLA-DRAP01903 254 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 ATICP31939 592 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 RGS7P49802 495 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 ARL13BQ3SXY8 428 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 TAF1BQ53T94 588 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 ZNF571Q7Z3V5 609 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 VPS39Q96JC1 886 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 RAB6BQ9NRW1 208 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 MID2Q9UJV3 735 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 CPSF3Q9UKF6 684 aaKnown RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 ADORA2BP29275 332 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 HNRNPH1P31943 449 aaKnown RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 IRX1P78414 480 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 POU5F1BQ06416 359 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 GPR162Q16538 588 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 DUSP9Q99956 384 aaKnown RBP11.49□□□□□ -0.57
CSMD2-204ENST00000373380 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
CSMD2-204ENST00000373380 GOLGA8QA0A0J9YX86 632 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 GOLGA8OA6NCC3 632 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 FAM47DPA6NHR8 397 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 CCT8L1PA6NM43 557 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 GOLGA8NF8WBI6 632 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 LMNAP02545 664 aaKnown RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 WEE2P0C1S8 567 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 RALAP11233 206 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PMLP29590 882 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 MAGEA4P43358 317 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 MAPK7Q13164 816 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PLCB4Q15147 1175 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 SMTNL2Q2TAL5 461 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ANKRD20A4Q4UJ75 823 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ANKRD20A8PQ5CZ79 823 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ANKRD20A2Q5SQ80 823 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 NT5DC1Q5TFE4 455 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ANKRD20A1Q5TYW2 823 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 RGS9BPQ6ZS82 235 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 SLC13A5Q86YT5 568 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 BBS5Q8N3I7 341 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ACSF2Q96CM8 615 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 DDX56Q9NY93 547 aaKnown RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PIM2Q9P1W9 311 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ANGPTL3Q9Y5C1 460 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 RGPD2P0DJD1 1756 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 COL5A2P05997 1499 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 HUS1O60921 280 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PRLRP16471 622 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 EEF1B2P24534 225 aaKnown RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 COPS2P61201 443 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PSMC6P62333 389 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 SATB1Q01826 763 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 AP1B1Q10567 949 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 DRP2Q13474 957 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PRAMEF18Q5VWM3 479 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 CDR2LQ86X02 465 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 LRRC34Q8IZ02 419 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ABI1Q8IZP0 508 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ACER1Q8TDN7 264 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 SLC26A7Q8TE54 656 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 TARS2Q9BW92 718 aaKnown RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PABPC3Q9H361 631 aaKnown RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 INTS13Q9NVM9 706 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 BFARQ9NZS9 450 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 SENP1Q9P0U3 644 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 CHMP2BQ9UQN3 213 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 A8MXQ7 604 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 ITGA4P13612 1032 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 RXRBP28702 533 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 IREB2P48200 963 aaKnown RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 DNAJC3Q13217 504 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 GIT2Q14161 759 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms